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GENE CARD

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Gene Card

Best human hits

SALL1; SALL2; SALL3

Species

M.oculata

Unique Gene ID

Moocul.g00004583

Gene Model ID

Moocul.CG.ELv1_2.S69361.g04583

Location

S69361:3345..16750

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S69361.g04583.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
heterochromatin Hs cellular component 216 8.45e-57
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 251 1.04e-68
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 216 8.45e-57
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 251 1.04e-68
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 216 8.45e-57
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 251 1.04e-68
nucleic acid binding Hs molecular function 251 1.04e-68
DNA binding Hs molecular function 251 1.04e-68
transcription factor activity, sequence-specific DNA binding Hs molecular function 251 1.04e-68
histone deacetylase activity Hs molecular function 216 8.45e-57
protein binding Hs molecular function 251 1.04e-68
nucleus Hs cellular component 251 1.04e-68
nucleoplasm Hs cellular component 216 8.45e-57
cytoplasm Hs cellular component 216 8.45e-57
beta-catenin binding Hs molecular function 216 8.45e-57
chromocenter Hs cellular component 216 8.45e-57
NuRD complex Hs cellular component 251 1.04e-68
sequence-specific DNA binding Hs molecular function 251 1.04e-68
transcription regulatory region DNA binding Hs molecular function 251 1.04e-68
metal ion binding Hs molecular function 251 1.04e-68

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 1.6E-4