Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

LARP6; LARP7; SSB

Species

M.oculata

Unique Gene ID

Moocul.g00005418

Gene Model ID

Moocul.CG.ELv1_2.S76386.g05418

Location

S76386:7984..10132

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S76386.g05418.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
La_HTH SMART La-type HTH domain
La_HTH Pfam La-type HTH domain
La_HTH ProSiteProfiles La-type HTH domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 42.7 3.13e-04
nuclear chromosome, telomeric region Hs cellular component 42.7 3.13e-04
nucleic acid binding Hs molecular function 110 3.90e-26
RNA binding Hs molecular function 110 3.90e-26
mRNA binding Hs molecular function 42.7 3.13e-04
protein binding Hs molecular function 110 3.90e-26
nucleus Hs cellular component 110 3.90e-26
nucleoplasm Hs cellular component 63.2 1.33e-10
cytoplasm Hs cellular component 110 3.90e-26
cytosol Hs cellular component 63.2 1.33e-10
polysome Hs cellular component 110 3.90e-26
poly(U) RNA binding Hs molecular function 42.7 3.13e-04
myosin binding Hs molecular function 110 3.90e-26
intracellular ribonucleoprotein complex Hs cellular component 110 3.90e-26
RNA stem-loop binding Hs molecular function 110 3.90e-26
mRNA 5'-UTR binding Hs molecular function 110 3.90e-26
sequence-specific mRNA binding Hs molecular function 110 3.90e-26

GO (InterProScan)

No result

GO Term Analysis Type e-value