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Gene Card

Best human hits

COPA; COPB2; PAFAH1B1

Species

M.oculata

Unique Gene ID

Moocul.g00005598

Gene Model ID

Moocul.CG.ELv1_2.S77608.g05598

Location

S77608:45823..56536

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S77608.g05598.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat ProSiteProfiles WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WD40_repeat SMART WD40 repeat
Coatomer_asu PIRSF Coatomer alpha subunit
Coatomer_asu_C Pfam Coatomer, alpha subunit, C-terminal
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
Coatomer_WD-assoc_reg Pfam Coatomer, WD associated region

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
hormone activity Hs molecular function
structural molecule activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
intra-Golgi vesicle-mediated transport Hs biological process
regulation of receptor activity Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
COPI vesicle coat Hs cellular component
transport vesicle Hs cellular component
COPI-coated vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 1955 0.0
astral microtubule Hs cellular component 112 4.00e-26
kinetochore Hs cellular component 112 4.00e-26
phospholipase A2 activity Hs molecular function 112 4.00e-26
hormone activity Hs molecular function 1955 0.0
structural molecule activity Hs molecular function 1955 0.0
protein binding Hs molecular function 1955 0.0
extracellular region Hs cellular component 1955 0.0
extracellular space Hs cellular component 1955 0.0
nucleus Hs cellular component 112 4.00e-26
nuclear envelope Hs cellular component 112 4.00e-26
cytoplasm Hs cellular component 1955 0.0
endoplasmic reticulum membrane Hs cellular component 1955 0.0
Golgi apparatus Hs cellular component 1955 0.0
centrosome Hs cellular component 112 4.00e-26
microtubule organizing center Hs cellular component 112 4.00e-26
spindle Hs cellular component 112 4.00e-26
cytosol Hs cellular component 1955 0.0
cytoskeleton Hs cellular component 112 4.00e-26
kinesin complex Hs cellular component 112 4.00e-26
microtubule Hs cellular component 112 4.00e-26
microtubule associated complex Hs cellular component 112 4.00e-26
cell cortex Hs cellular component 112 4.00e-26
microtubule binding Hs molecular function 112 4.00e-26
heparin binding Hs molecular function 112 4.00e-26
microtubule cytoskeleton Hs cellular component 112 4.00e-26
membrane Hs cellular component 1955 0.0
membrane coat Hs cellular component 1955 0.0
COPI vesicle coat Hs cellular component 1955 0.0
transport vesicle Hs cellular component 1955 0.0
axon Hs cellular component 112 4.00e-26
growth cone Hs cellular component 112 4.00e-26
COPI-coated vesicle membrane Hs cellular component 1955 0.0
cell leading edge Hs cellular component 112 4.00e-26
cytoplasmic vesicle Hs cellular component 1955 0.0
motile cilium Hs cellular component 112 4.00e-26
nuclear membrane Hs cellular component 112 4.00e-26
vesicle Hs cellular component 112 4.00e-26
stereocilium Hs cellular component 112 4.00e-26
dynactin binding Hs molecular function 112 4.00e-26
protein homodimerization activity Hs molecular function 112 4.00e-26
neuron projection Hs cellular component 112 4.00e-26
neuronal cell body Hs cellular component 112 4.00e-26
phospholipase binding Hs molecular function 112 4.00e-26
dynein intermediate chain binding Hs molecular function 112 4.00e-26
perinuclear region of cytoplasm Hs cellular component 112 4.00e-26
phosphoprotein binding Hs molecular function 112 4.00e-26
extracellular exosome Hs cellular component 1955 0.0
dynein complex binding Hs molecular function 112 4.00e-26
central region of growth cone Hs cellular component 112 4.00e-26
axon cytoplasm Hs cellular component 112 4.00e-26

GO (InterProScan)

6 results

GO Term Analysis Type e-value
structural molecule activity Pfam molecular function 8.6E-174
protein binding Pfam molecular function 8.6E-174
intracellular protein transport Pfam biological process 8.6E-174
vesicle-mediated transport Pfam biological process 8.6E-174
membrane coat Pfam cellular component 2.0E-140
COPI vesicle coat Pfam cellular component 8.6E-174





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