Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

DNA2; IGHMBP2; UPF1

Species

M.oculata

Unique Gene ID

Moocul.g00006057

Gene Model ID

Moocul.CG.ELv1_2.S81791.g06057

Location

S81791:16817..29408

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S81791.g06057.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
DNA_replication_fac_Dna2_N Pfam DNA replication factor Dna2, N-terminal
Dna2 PANTHER Dna2

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
DNA replication checkpoint Hs biological process
nucleotide binding Hs molecular function
telomere maintenance Hs biological process
DNA double-strand break processing Hs biological process
DNA synthesis involved in DNA repair Hs biological process
strand displacement Hs biological process
nuclear chromosome, telomeric region Hs cellular component
DNA binding Hs molecular function
DNA helicase activity Hs molecular function
catalytic activity Hs molecular function
helicase activity Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
mitochondrion Hs cellular component
gamma DNA polymerase complex Hs cellular component
DNA replication Hs biological process
mitochondrial DNA replication Hs biological process
DNA repair Hs biological process
base-excision repair Hs biological process
cellular response to DNA damage stimulus Hs biological process
metabolic process Hs biological process
hydrolase activity Hs molecular function
ATPase activity Hs molecular function
site-specific endodeoxyribonuclease activity, specific for altered base Hs molecular function
5'-flap endonuclease activity Hs molecular function
DNA duplex unwinding Hs biological process
DNA replication, Okazaki fragment processing Hs biological process
mitochondrial nucleoid Hs cellular component
DNA replication, removal of RNA primer Hs biological process
5'-3' DNA helicase activity Hs molecular function
single-stranded DNA-dependent ATPase activity Hs molecular function
mitochondrial DNA repair Hs biological process
G-quadruplex DNA unwinding Hs biological process
positive regulation of DNA replication Hs biological process
metal ion binding Hs molecular function
iron-sulfur cluster binding Hs molecular function
4 iron, 4 sulfur cluster binding Hs molecular function
nucleic acid phosphodiester bond hydrolysis Hs biological process

GO (Blast)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
tRNA binding Hs molecular function 154 5.21e-38
nucleotide binding Hs molecular function 686 0.0
nuclear chromosome, telomeric region Hs cellular component 686 0.0
chromatin Hs cellular component 152 2.23e-37
P-body Hs cellular component 152 2.23e-37
nucleic acid binding Hs molecular function 154 5.21e-38
DNA binding Hs molecular function 686 0.0
DNA helicase activity Hs molecular function 686 0.0
chromatin binding Hs molecular function 152 2.23e-37
single-stranded DNA binding Hs molecular function 154 5.21e-38
RNA binding Hs molecular function 154 5.21e-38
catalytic activity Hs molecular function 686 0.0
ATP-dependent RNA helicase activity Hs molecular function 152 2.23e-37
helicase activity Hs molecular function 686 0.0
nuclease activity Hs molecular function 686 0.0
endonuclease activity Hs molecular function 686 0.0
protein binding Hs molecular function 686 0.0
ATP binding Hs molecular function 686 0.0
nucleus Hs cellular component 686 0.0
nucleoplasm Hs cellular component 686 0.0
cytoplasm Hs cellular component 154 5.21e-38
mitochondrion Hs cellular component 686 0.0
gamma DNA polymerase complex Hs cellular component 686 0.0
cytosol Hs cellular component 152 2.23e-37
DNA-dependent ATPase activity Hs molecular function 154 5.21e-38
transcription factor binding Hs molecular function 154 5.21e-38
RNA-dependent ATPase activity Hs molecular function 154 5.21e-38
zinc ion binding Hs molecular function 154 5.21e-38
membrane Hs cellular component 154 5.21e-38
hydrolase activity Hs molecular function 686 0.0
ATPase activity Hs molecular function 686 0.0
site-specific endodeoxyribonuclease activity, specific for altered base Hs molecular function 686 0.0
5'-flap endonuclease activity Hs molecular function 686 0.0
axon Hs cellular component 154 5.21e-38
growth cone Hs cellular component 154 5.21e-38
intracellular ribonucleoprotein complex Hs cellular component 154 5.21e-38
ATP-dependent 5'-3' RNA helicase activity Hs molecular function 154 5.21e-38
exon-exon junction complex Hs cellular component 152 2.23e-37
telomeric DNA binding Hs molecular function 152 2.23e-37
mitochondrial nucleoid Hs cellular component 686 0.0
cell projection Hs cellular component 154 5.21e-38
ribosome binding Hs molecular function 154 5.21e-38
5'-3' DNA helicase activity Hs molecular function 686 0.0
ATP-dependent 5'-3' DNA helicase activity Hs molecular function 154 5.21e-38
single-stranded DNA-dependent ATPase activity Hs molecular function 686 0.0
supraspliceosomal complex Hs cellular component 152 2.23e-37
metal ion binding Hs molecular function 686 0.0
iron-sulfur cluster binding Hs molecular function 686 0.0
4 iron, 4 sulfur cluster binding Hs molecular function 686 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
5'-flap endonuclease activity PANTHER molecular function 4.6E-175
DNA replication, Okazaki fragment processing PANTHER biological process 4.6E-175
single-stranded DNA-dependent ATPase activity PANTHER molecular function 4.6E-175

Back to Top