Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

TRIM2; TRIM3; TRIM45

Species

M.oculata

Unique Gene ID

Moocul.g00006116

Gene Model ID

Moocul.CG.ELv1_2.S82174.g06116

Location

S82174:2378..7590

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S82174.g06116.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Znf_RING ProSiteProfiles Zinc finger, RING-type
Filamin/ABP280_repeat-like ProSiteProfiles Filamin/ABP280 repeat-like
Znf-RING_LisH Pfam RING-type zinc-finger, LisH dimerisation motif
Bbox_C SMART B-box, C-terminal
Filamin/ABP280_repeat-like Pfam Filamin/ABP280 repeat-like
Ig-like_fold Gene3D Immunoglobulin-like fold
Ig_E-set SUPERFAMILY Immunoglobulin E-set
Filamin/ABP280_rpt SMART Filamin/ABP280 repeat
Znf_RING_CS ProSitePatterns Zinc finger, RING-type, conserved site
Znf_B-box ProSiteProfiles B-box-type zinc finger
Znf_B-box SMART B-box-type zinc finger
Znf_RING SMART Zinc finger, RING-type
Znf_B-box CDD B-box-type zinc finger

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
zinc ion binding Hs molecular function
intercellular bridge Hs cellular component
metal ion binding Hs molecular function
bone development Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 120 5.53e-28
protein binding Hs molecular function 243 1.62e-70
intracellular Hs cellular component 243 1.62e-70
nucleus Hs cellular component 243 1.62e-70
nucleoplasm Hs cellular component 243 1.62e-70
cytoplasm Hs cellular component 243 1.62e-70
endosome Hs cellular component 120 5.53e-28
early endosome Hs cellular component 120 5.53e-28
Golgi apparatus Hs cellular component 120 5.53e-28
cytosol Hs cellular component 243 1.62e-70
protein C-terminus binding Hs molecular function 120 5.53e-28
zinc ion binding Hs molecular function 243 1.62e-70
transferase activity Hs molecular function 108 3.76e-24
dendrite Hs cellular component 120 5.53e-28
cell projection Hs cellular component 120 5.53e-28
intercellular bridge Hs cellular component 243 1.62e-70
metal ion binding Hs molecular function 243 1.62e-70
ubiquitin protein ligase activity Hs molecular function 120 5.53e-28

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein binding SMART molecular function 9.6E-8
intracellular SMART cellular component 4.1E-13
zinc ion binding CDD molecular function 1.36218E-5