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GENE CARD

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Gene Card

Best human hits

SMG5; SMG6

Species

M.oculata

Unique Gene ID

Moocul.g00006301

Gene Model ID

Moocul.CG.ELv1_2.S83557.g06301

Location

S83557:50572..70876

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S83557.g06301.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
PIN_dom Pfam PIN domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
ribonuclease activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
telomerase holoenzyme complex Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
mRNA export from nucleus Hs biological process
ubiquitin protein ligase binding Hs molecular function
regulation of telomere maintenance via telomerase Hs biological process
regulation of dephosphorylation Hs biological process
telomeric DNA binding Hs molecular function
histone deacetylase binding Hs molecular function
ribonucleoprotein complex binding Hs molecular function
regulation of RNA stability Hs biological process
protein phosphatase 2A binding Hs molecular function
telomerase RNA binding Hs molecular function
DNA polymerase binding Hs molecular function
RNA phosphodiester bond hydrolysis Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
telomerase catalytic core complex Hs cellular component 48.1 7.30e-07
chromosome, telomeric region Hs cellular component 48.1 7.30e-07
DNA binding Hs molecular function 48.1 7.30e-07
RNA binding Hs molecular function 48.1 7.30e-07
nuclease activity Hs molecular function 48.1 7.30e-07
endonuclease activity Hs molecular function 48.1 7.30e-07
endoribonuclease activity Hs molecular function 48.1 7.30e-07
ribonuclease activity Hs molecular function 121 1.60e-32
protein binding Hs molecular function 121 1.60e-32
nucleus Hs cellular component 121 1.60e-32
chromosome Hs cellular component 48.1 7.30e-07
telomerase holoenzyme complex Hs cellular component 121 1.60e-32
nucleolus Hs cellular component 48.1 7.30e-07
cytoplasm Hs cellular component 121 1.60e-32
cytosol Hs cellular component 121 1.60e-32
hydrolase activity Hs molecular function 48.1 7.30e-07
ubiquitin protein ligase binding Hs molecular function 121 1.60e-32
exon-exon junction complex Hs cellular component 48.1 7.30e-07
telomeric DNA binding Hs molecular function 121 1.60e-32
histone deacetylase binding Hs molecular function 121 1.60e-32
ribonucleoprotein complex binding Hs molecular function 121 1.60e-32
metal ion binding Hs molecular function 48.1 7.30e-07
protein phosphatase 2A binding Hs molecular function 121 1.60e-32
telomerase RNA binding Hs molecular function 121 1.60e-32
DNA polymerase binding Hs molecular function 121 1.60e-32

GO (InterProScan)

No result

GO Term Analysis Type e-value