Aniseed - Gene card

Gene Card

Best human hits

DDX58; DHX58; IFIH1

Species

M.oculata

Unique Gene ID

Moocul.g00006496

Gene Model ID

Moocul.CG.ELv1_2.S85296.g06496

Location

S85296:47..12907

Transcript Models and Sequences

Moocul.CG.ELv1_2.S85296.g06496.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

18 results

IPR Term	Analysis	Definition
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
AAA+_ATPase	SMART	AAA+ ATPase domain
RLR_CTR	ProSiteProfiles	RIG-I-like receptor, C-terminal regulatory domain
KEN_dom	ProSiteProfiles	KEN domain
Prot_kinase_dom	ProSiteProfiles	Protein kinase domain
Prot_kinase_dom	Pfam	Protein kinase domain
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
Helicase_C	Pfam	Helicase, C-terminal
KEN_dom	Pfam	KEN domain
Helicase_C	CDD	Helicase, C-terminal
Helicase_C	ProSiteProfiles	Helicase, C-terminal
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Helicase_C	SMART	Helicase, C-terminal
RLR_CTR	Pfam	RIG-I-like receptor, C-terminal regulatory domain
KEN_sf	Gene3D	KEN domain superfamily
Kinase-like_dom_sf	SUPERFAMILY	Protein kinase-like domain superfamily
RLR_C_sf	Gene3D	RIG-I-like receptor, C-terminal domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	227	2.63e-61
nucleic acid binding	Hs	molecular function	227	2.63e-61
DNA binding	Hs	molecular function	220	1.57e-60
double-stranded DNA binding	Hs	molecular function	227	2.63e-61
RNA binding	Hs	molecular function	227	2.63e-61
double-stranded RNA binding	Hs	molecular function	227	2.63e-61
single-stranded RNA binding	Hs	molecular function	227	2.63e-61
helicase activity	Hs	molecular function	227	2.63e-61
protein binding	Hs	molecular function	227	2.63e-61
ATP binding	Hs	molecular function	227	2.63e-61
nucleus	Hs	cellular component	210	1.37e-55
cytoplasm	Hs	cellular component	227	2.63e-61
cytosol	Hs	cellular component	227	2.63e-61
cytoskeleton	Hs	cellular component	227	2.63e-61
plasma membrane	Hs	cellular component	227	2.63e-61
bicellular tight junction	Hs	cellular component	227	2.63e-61
zinc ion binding	Hs	molecular function	227	2.63e-61
actin cytoskeleton	Hs	cellular component	227	2.63e-61
membrane	Hs	cellular component	227	2.63e-61
hydrolase activity	Hs	molecular function	227	2.63e-61
cell junction	Hs	cellular component	227	2.63e-61
ubiquitin protein ligase binding	Hs	molecular function	227	2.63e-61
ruffle membrane	Hs	cellular component	227	2.63e-61
identical protein binding	Hs	molecular function	227	2.63e-61
cell projection	Hs	cellular component	227	2.63e-61
ribonucleoprotein complex binding	Hs	molecular function	210	1.37e-55
metal ion binding	Hs	molecular function	227	2.63e-61

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	3.9E-22
ATP binding	Pfam	molecular function	3.9E-22
ribonuclease activity	Pfam	molecular function	1.5E-20
protein kinase activity	Pfam	molecular function	2.1E-6
mRNA processing	Pfam	biological process	1.5E-20
protein phosphorylation	Pfam	biological process	2.1E-6