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GENE CARD

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  1. EST 'BW261364'
  2. EST 'AL663616'

Gene Card

Best human hits

AGO1; AGO2; AGO3

Species

M.oculata

Unique Gene ID

Moocul.g00006841

Gene Model ID

Moocul.CG.ELv1_2.S87999.g06841

Location

S87999:10303..19458

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S87999.g06841.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
Piwi Pfam Piwi domain
Argonaute_N Pfam Protein argonaute, N-terminal
ArgoL1 Pfam Argonaute, linker 1 domain
PAZ_dom ProSiteProfiles PAZ domain
PAZ_dom SMART PAZ domain
PAZ_dom_sf SUPERFAMILY PAZ domain superfamily
ArgoL1 SMART Argonaute, linker 1 domain
RNaseH-like_sf SUPERFAMILY Ribonuclease H-like superfamily
RNaseH_sf Gene3D Ribonuclease H superfamily
ArgoL2 Pfam Argonaute linker 2 domain
PAZ_dom Pfam PAZ domain
Piwi ProSiteProfiles Piwi domain
Argonaute_Mid_dom Pfam Protein argonaute, Mid domain
Piwi SMART Piwi domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA 7-methylguanosine cap binding Hs molecular function 1331 0.0
condensed nuclear chromosome Hs cellular component 1250 0.0
P-body Hs cellular component 1331 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 1285 0.0
RNA polymerase II core binding Hs molecular function 1331 0.0
core promoter binding Hs molecular function 1331 0.0
nucleic acid binding Hs molecular function 1331 0.0
RNA binding Hs molecular function 1331 0.0
double-stranded RNA binding Hs molecular function 1331 0.0
single-stranded RNA binding Hs molecular function 1331 0.0
mRNA binding Hs molecular function 1331 0.0
translation initiation factor activity Hs molecular function 1331 0.0
nuclease activity Hs molecular function 1331 0.0
endonuclease activity Hs molecular function 1331 0.0
endoribonuclease activity Hs molecular function 1331 0.0
protein binding Hs molecular function 1331 0.0
nucleus Hs cellular component 1331 0.0
nucleoplasm Hs cellular component 1331 0.0
cytoplasm Hs cellular component 1331 0.0
cytosol Hs cellular component 1331 0.0
polysome Hs cellular component 1331 0.0
mRNA cap binding complex Hs cellular component 1331 0.0
protein C-terminus binding Hs molecular function 1331 0.0
membrane Hs cellular component 1331 0.0
RISC complex Hs cellular component 1331 0.0
hydrolase activity Hs molecular function 1331 0.0
cell junction Hs cellular component 1331 0.0
dendrite Hs cellular component 1331 0.0
intracellular ribonucleoprotein complex Hs cellular component 1331 0.0
micro-ribonucleoprotein complex Hs cellular component 1331 0.0
siRNA binding Hs molecular function 1331 0.0
miRNA binding Hs molecular function 1331 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 1250 0.0
transcription regulatory region DNA binding Hs molecular function 1285 0.0
metal ion binding Hs molecular function 1331 0.0
extracellular exosome Hs cellular component 1331 0.0
endoribonuclease activity, cleaving siRNA-paired mRNA Hs molecular function 1331 0.0
RISC-loading complex Hs cellular component 1331 0.0
endoribonuclease activity, cleaving miRNA-paired mRNA Hs molecular function 1331 0.0
mRNA cap binding Hs molecular function 1331 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Gene3D molecular function 8.7E-132
protein binding SUPERFAMILY molecular function 1.88E-63