Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

HDGFL2; HDGFL3; PSIP1

Species

M.oculata

Unique Gene ID

Moocul.g00006969

Gene Model ID

Moocul.CG.ELv1_2.S88948.g06969

Location

S88948:34516..38645

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S88948.g06969.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
HDGF-rel_PWWP CDD HDGF-related, PWWP domain
PWWP_dom ProSiteProfiles PWWP domain
TFIIS/LEDGF_dom_sf Gene3D TFIIS/LEDGF domain superfamily
HIVI-bd_sf SUPERFAMILY HIV integrase-binding domain superfamily
PWWP_dom SMART PWWP domain
PWWP_dom Pfam PWWP domain
LEDGF_IBD Pfam Lens epithelium-derived growth factor, integrase-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
mRNA 5'-splice site recognition Hs biological process
DNA binding Hs molecular function
chromatin binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
response to oxidative stress Hs biological process
response to heat Hs biological process
viral process Hs biological process
positive regulation of cell growth Hs biological process
transcriptionally active chromatin Hs cellular component
nuclear transport Hs biological process
supercoiled DNA binding Hs molecular function

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 169 2.82e-45
chromatin binding Hs molecular function 157 1.01e-40
RNA binding Hs molecular function 169 2.82e-45
protein binding Hs molecular function 169 2.82e-45
extracellular region Hs cellular component 169 1.13e-48
nucleus Hs cellular component 169 1.13e-48
nucleoplasm Hs cellular component 169 1.13e-48
cytoplasm Hs cellular component 169 1.13e-48
cytosol Hs cellular component 169 1.13e-48
microtubule binding Hs molecular function 169 1.13e-48
growth factor activity Hs molecular function 169 1.13e-48
tubulin binding Hs molecular function 169 1.13e-48
transcriptionally active chromatin Hs cellular component 169 2.82e-45
supercoiled DNA binding Hs molecular function 169 2.82e-45

GO (InterProScan)

No result

GO Term Analysis Type e-value