Aniseed - Gene card

Gene Card

Best human hits

TBX19; TBX5; TBXT

Species

M.oculata

Unique Gene ID

Moocul.g00007224

Gene Model ID

Moocul.CG.ELv1_2.S90886.g07224

Location

S90886:8618..12256

Transcript Models and Sequences

Moocul.CG.ELv1_2.S90886.g07224.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
TF_T-box	PANTHER	Transcription factor, T-box
TF_T-box	ProSiteProfiles	Transcription factor, T-box
TF_T-box_CS	ProSitePatterns	Transcription factor, T-box, conserved site
p53-like_TF_DNA-bd	SUPERFAMILY	p53-like transcription factor, DNA-binding
TF_T-box	CDD	Transcription factor, T-box
T-box_sf	Gene3D	T-box superfamily
TF_Brachyury	PRINTS	Transcription factor, Brachyury
TF_T-box	SMART	Transcription factor, T-box
TF_T-box	PRINTS	Transcription factor, T-box
TF_T-box	Pfam	Transcription factor, T-box

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromatin	Hs	cellular component	287	3.03e-94
nuclear chromatin	Hs	cellular component	287	3.03e-94
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	207	2.93e-62
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	287	3.03e-94
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	287	3.03e-94
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	287	3.03e-94
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	273	8.35e-89
RNA polymerase II transcription factor binding	Hs	molecular function	287	3.03e-94
RNA polymerase II activating transcription factor binding	Hs	molecular function	287	3.03e-94
enhancer sequence-specific DNA binding	Hs	molecular function	273	8.35e-89
transcriptional repressor activity, RNA polymerase II transcription factor binding	Hs	molecular function	287	3.03e-94
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	207	2.93e-62
DNA binding	Hs	molecular function	287	3.03e-94
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	287	3.03e-94
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	287	3.03e-94
protein binding	Hs	molecular function	207	2.93e-62
nucleus	Hs	cellular component	287	3.03e-94
nucleoplasm	Hs	cellular component	207	2.93e-62
cytoplasm	Hs	cellular component	287	3.03e-94
transcription factor binding	Hs	molecular function	207	2.93e-62
macromolecular complex	Hs	cellular component	207	2.93e-62
protein-DNA complex	Hs	cellular component	207	2.93e-62
sequence-specific DNA binding	Hs	molecular function	287	3.03e-94

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	1.0E-117
nucleus	PANTHER	cellular component	1.0E-117
regulation of transcription, DNA-templated	PANTHER	biological process	1.0E-117