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GENE CARD

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Gene Card

Best human hits

ISY1; ISY1-RAB43

Species

M.oculata

Unique Gene ID

Moocul.g00007701

Gene Model ID

Moocul.CG.ELv1_2.S94060.g07701

Location

S94060:1868..2693

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S94060.g07701.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Isy1 PANTHER Pre-mRNA-splicing factor Isy1
Isy1_sf SUPERFAMILY Pre-mRNA-splicing factor Isy1 superfamily
Isy1 Pfam Pre-mRNA-splicing factor Isy1
Helix_hairpin_bin_sf Gene3D Helix hairpin bin domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
generation of catalytic spliceosome for second transesterification step Hs biological process
first spliceosomal transesterification activity Hs molecular function
mRNA 3'-splice site recognition Hs biological process
mRNA splicing, via spliceosome Hs biological process
Prp19 complex Hs cellular component
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
transcription-coupled nucleotide-excision repair Hs biological process
mRNA processing Hs biological process
RNA splicing Hs biological process
catalytic step 1 spliceosome Hs cellular component
catalytic step 2 spliceosome Hs cellular component
post-mRNA release spliceosomal complex Hs cellular component
post-spliceosomal complex Hs cellular component

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
first spliceosomal transesterification activity Hs molecular function 323 3.43e-111
Prp19 complex Hs cellular component 323 3.43e-111
RNA binding Hs molecular function 323 3.43e-111
protein binding Hs molecular function 323 3.43e-111
nucleus Hs cellular component 323 3.43e-111
nucleoplasm Hs cellular component 323 3.43e-111
spliceosomal complex Hs cellular component 323 3.43e-111
catalytic step 1 spliceosome Hs cellular component 323 3.43e-111
catalytic step 2 spliceosome Hs cellular component 323 3.43e-111
post-mRNA release spliceosomal complex Hs cellular component 323 3.43e-111
post-spliceosomal complex Hs cellular component 323 3.43e-111

GO (InterProScan)

1 result

GO Term Analysis Type e-value
generation of catalytic spliceosome for second transesterification step PANTHER biological process 1.4E-104