Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

ADGRB3; HMCN1; THBS1

Unique Gene ID

Cirobu.g00015594

Gene Model ID

NCBI:KH.100185395

Location

KhC6:22320..27236

Transcript Models and Sequences

  NCBI:KH.XM_018812258.1

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat

GOSlim

35 results

GO Term Annotation Origin Type
signal transducer activity Blast molecular function
transmembrane signaling receptor activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
GTPase activator activity Blast molecular function
integrin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum lumen Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
identical protein binding Blast molecular function
extracellular exosome Blast cellular component
postsynapse Blast cellular component
anion binding Blast molecular function
macromolecular complex Blast cellular component
extracellular region part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
carbohydrate derivative binding Blast molecular function
plasma membrane part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
macromolecular complex binding Blast molecular function
intracellular organelle part Blast cellular component
intracellular organelle lumen Blast cellular component
plasma membrane region Blast cellular component
synapse part Blast cellular component
binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

43 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
phosphatidylserine binding Hs molecular function 79.3 3.44e-15
fibronectin binding Hs molecular function 79.3 3.44e-15
signal transducer activity Hs molecular function 80.9 1.24e-15
transmembrane signaling receptor activity Hs molecular function 80.9 1.24e-15
G-protein coupled receptor activity Hs molecular function 80.9 1.24e-15
GTPase activator activity Hs molecular function 80.9 1.24e-15
integrin binding Hs molecular function 79.3 3.44e-15
calcium ion binding Hs molecular function 83.6 2.39e-16
protein binding Hs molecular function 80.9 1.24e-15
extracellular region Hs cellular component 83.6 2.39e-16
fibrinogen complex Hs cellular component 79.3 3.44e-15
proteinaceous extracellular matrix Hs cellular component 83.6 2.39e-16
basement membrane Hs cellular component 83.6 2.39e-16
extracellular space Hs cellular component 79.3 3.44e-15
cytoplasm Hs cellular component 83.6 2.39e-16
endoplasmic reticulum Hs cellular component 79.3 3.44e-15
endoplasmic reticulum lumen Hs cellular component 79.3 3.44e-15
plasma membrane Hs cellular component 80.9 1.24e-15
cell cortex Hs cellular component 83.6 2.39e-16
heparin binding Hs molecular function 79.3 3.44e-15
external side of plasma membrane Hs cellular component 79.3 3.44e-15
cell surface Hs cellular component 79.3 3.44e-15
membrane Hs cellular component 80.9 1.24e-15
integral component of membrane Hs cellular component 80.9 1.24e-15
sarcoplasmic reticulum Hs cellular component 79.3 3.44e-15
fibroblast growth factor binding Hs molecular function 79.3 3.44e-15
cell junction Hs cellular component 83.6 2.39e-16
secretory granule Hs cellular component 79.3 3.44e-15
low-density lipoprotein particle binding Hs molecular function 79.3 3.44e-15
extracellular matrix Hs cellular component 83.6 2.39e-16
platelet alpha granule Hs cellular component 79.3 3.44e-15
platelet alpha granule lumen Hs cellular component 79.3 3.44e-15
cleavage furrow Hs cellular component 83.6 2.39e-16
identical protein binding Hs molecular function 79.3 3.44e-15
synaptic cleft Hs cellular component 80.9 1.24e-15
laminin binding Hs molecular function 79.3 3.44e-15
proteoglycan binding Hs molecular function 79.3 3.44e-15
transforming growth factor beta binding Hs molecular function 79.3 3.44e-15
extracellular matrix binding Hs molecular function 79.3 3.44e-15
fibrinogen binding Hs molecular function 79.3 3.44e-15
collagen V binding Hs molecular function 79.3 3.44e-15
extracellular exosome Hs cellular component 83.6 2.39e-16
postsynapse Hs cellular component 80.9 1.24e-15

GO (InterProScan)

No result

GO Term Analysis Type e-value