Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
EF-hand-dom_pair	SUPERFAMILY	EF-hand domain pair
EF_hand_dom	Pfam	EF-hand domain
EF_hand_dom	ProSiteProfiles	EF-hand domain
EF_Hand_1_Ca_BS	ProSitePatterns	EF-Hand 1, calcium-binding site

GOSlim

26 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
DNA binding	Orthology	molecular function
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
early endosome	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
endoplasmic reticulum membrane	Blast	cellular component
Golgi apparatus	Orthology	cellular component
membrane	Orthology	cellular component
metal ion binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
Golgi apparatus part	Orthology	cellular component
cellular protein modification process	Orthology	biological process
membrane part	Orthology	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
intracellular organelle part	Blast	cellular component
endomembrane system	Blast	cellular component

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G-protein alpha-subunit binding	Hs	molecular function
DNA binding	Hs	molecular function
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
extracellular space	Hs	cellular component
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
early endosome	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
rough endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component
Golgi apparatus	Hs	cellular component
Golgi-associated vesicle	Hs	cellular component
cis-Golgi network	Hs	cellular component
trans-Golgi network	Hs	cellular component
membrane	Hs	cellular component
Golgi cisterna membrane	Hs	cellular component
post-translational protein modification	Hs	biological process
metal ion binding	Hs	molecular function
extracellular exosome	Hs	cellular component
extrinsic component of Golgi membrane	Hs	cellular component
lumenal side of Golgi membrane	Hs	cellular component

GO (Blast)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	39.3	3.58e-04
G-protein alpha-subunit binding	Hs	molecular function	79.0	2.32e-17
DNA binding	Hs	molecular function	79.0	2.32e-17
calcium ion binding	Hs	molecular function	104	1.38e-26
protein binding	Hs	molecular function	79.0	2.32e-17
extracellular region	Hs	cellular component	79.0	2.32e-17
extracellular space	Hs	cellular component	79.0	2.32e-17
nucleus	Hs	cellular component	79.0	2.32e-17
cytoplasm	Hs	cellular component	79.0	2.32e-17
early endosome	Hs	cellular component	79.0	2.32e-17
endoplasmic reticulum	Hs	cellular component	39.3	3.58e-04
endoplasmic reticulum lumen	Hs	cellular component	79.0	2.32e-17
endoplasmic reticulum membrane	Hs	cellular component	39.3	3.58e-04
rough endoplasmic reticulum	Hs	cellular component	79.0	2.32e-17
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	79.0	2.32e-17
Golgi apparatus	Hs	cellular component	79.0	2.32e-17
Golgi-associated vesicle	Hs	cellular component	79.0	2.32e-17
cis-Golgi network	Hs	cellular component	79.0	2.32e-17
trans-Golgi network	Hs	cellular component	79.0	2.32e-17
ER to Golgi transport vesicle membrane	Hs	cellular component	39.3	3.58e-04
membrane	Hs	cellular component	79.0	2.32e-17
Golgi cisterna membrane	Hs	cellular component	79.0	2.32e-17
endoplasmic reticulum-Golgi intermediate compartment membrane	Hs	cellular component	39.3	3.58e-04
metal ion binding	Hs	molecular function	79.0	2.32e-17
extracellular exosome	Hs	cellular component	79.0	2.32e-17
extrinsic component of Golgi membrane	Hs	cellular component	79.0	2.32e-17
lumenal side of Golgi membrane	Hs	cellular component	79.0	2.32e-17

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
calcium ion binding	Pfam	molecular function	1.8E-9

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location