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GENE CARD

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Gene Card

Best human hits

ANGPTL7; TNXB

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00015798

Gene Model ID

NCBI:KH.104266077

Location

KhC9:6476420..6478056

Transcript Models and Sequences

  NCBI:KH.XM_009861527.2

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal
Fibrinogen_a/b/g_C_1 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
Fibrinogen_a/b/g_C_dom SMART Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_2 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain

GOSlim

36 results

GO Term Annotation Origin Type
integrin binding Blast molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
intracellular Blast cellular component
extracellular exosome Orthology cellular component
immune system process Orthology biological process
serine-type endopeptidase activity Orthology molecular function
plasma membrane Orthology cellular component
proteolysis Orthology biological process
G-protein coupled receptor signaling pathway Orthology biological process
membrane Orthology cellular component
innate immune response Orthology biological process
metal ion binding Orthology molecular function
receptor binding Orthology molecular function
protein metabolic process Orthology biological process
binding Orthology molecular function
macromolecular complex Orthology cellular component
immune response Orthology biological process
signal transduction Orthology biological process
signaling receptor activity Orthology molecular function
plasma membrane part Orthology cellular component
cell surface Orthology cellular component
small molecule binding Orthology molecular function
anion binding Orthology molecular function
carbohydrate derivative binding Orthology molecular function
cellular protein localization Orthology biological process
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
response to bacterium Orthology biological process
defense response Orthology biological process
extracellular region part Blast cellular component

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular exosome Hs cellular component
G-protein coupled receptor binding Hs molecular function
complement activation, lectin pathway Hs biological process
immune system process Hs biological process
antigen binding Hs molecular function
serine-type endopeptidase activity Hs molecular function
collagen trimer Hs cellular component
plasma membrane Hs cellular component
proteolysis Hs biological process
complement activation Hs biological process
G-protein coupled receptor signaling pathway Hs biological process
signaling pattern recognition receptor activity Hs molecular function
membrane Hs cellular component
carbohydrate binding Hs molecular function
extrinsic component of external side of plasma membrane Hs cellular component
sialic acid binding Hs molecular function
protein localization to cell surface Hs biological process
secretory granule lumen Hs cellular component
proteoglycan binding Hs molecular function
recognition of apoptotic cell Hs biological process
innate immune response Hs biological process
metal ion binding Hs molecular function
calcium-dependent protein binding Hs molecular function
defense response to Gram-negative bacterium Hs biological process
defense response to Gram-positive bacterium Hs biological process
defense response to virus Hs biological process
blood microparticle Hs cellular component
ficolin-1-rich granule lumen Hs cellular component
mannan binding Hs molecular function

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
integrin binding Hs molecular function 132 6.73e-34
protein binding Hs molecular function 132 6.73e-34
extracellular region Hs cellular component 132 6.73e-34
proteinaceous extracellular matrix Hs cellular component 132 6.73e-34
fibrillar collagen trimer Hs cellular component 132 6.73e-34
extracellular space Hs cellular component 132 6.73e-34
intracellular Hs cellular component 132 6.73e-34
heparin binding Hs molecular function 132 6.73e-34
extracellular matrix Hs cellular component 132 6.73e-34
extracellular exosome Hs cellular component 132 6.73e-34

GO (InterProScan)

No result

GO Term Analysis Type e-value

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