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GENE CARD

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Gene Card

Best human hits

HMCN1; SPON1; SPON2

Species

P.fumigata

Unique Gene ID

Phfumi.g00003233

Gene Model ID

Phfumi.CG.MTP2014.S1088.g03233

Location

S1088:7187..15095

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
Reeler_dom Pfam Reeler domain
Reeler_dom ProSiteProfiles Reeler domain
Spondin_N_sf Gene3D Spondin, N-terminal domain superfamily
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
Reeler_dom CDD Reeler domain
Spondin_N ProSiteProfiles Spondin, N-terminal
Spondin_N Pfam Spondin, N-terminal

GOSlim

17 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
cytoplasm Blast cellular component
endoplasmic reticulum lumen Orthology cellular component
cell adhesion Orthology biological process
cell junction Blast cellular component
metal ion binding Orthology molecular function
extracellular exosome Blast cellular component
extracellular region part Orthology cellular component
cellular protein modification process Orthology biological process
carbohydrate derivative binding Blast molecular function
binding Blast molecular function
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
plasma membrane region Blast cellular component

GO (Orthology)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
extracellular space Hs cellular component
endoplasmic reticulum lumen Hs cellular component
cell adhesion Hs biological process
extracellular matrix Hs cellular component
protein O-linked fucosylation Hs biological process
metal ion binding Hs molecular function

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
lipopolysaccharide binding Hs molecular function 139 3.94e-36
antigen binding Hs molecular function 139 3.94e-36
calcium ion binding Hs molecular function 98.6 1.21e-20
protein binding Hs molecular function 513 3.06e-169
extracellular region Hs cellular component 513 3.06e-169
proteinaceous extracellular matrix Hs cellular component 513 3.06e-169
basement membrane Hs cellular component 98.6 1.21e-20
extracellular space Hs cellular component 513 3.06e-169
cytoplasm Hs cellular component 98.6 1.21e-20
endoplasmic reticulum lumen Hs cellular component 513 3.06e-169
cell cortex Hs cellular component 98.6 1.21e-20
cell junction Hs cellular component 98.6 1.21e-20
extracellular matrix Hs cellular component 513 3.06e-169
cleavage furrow Hs cellular component 98.6 1.21e-20
metal ion binding Hs molecular function 513 3.06e-169
extracellular exosome Hs cellular component 139 3.94e-36

GO (InterProScan)

No result

GO Term Analysis Type e-value