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Gene Card

Best human hits

SF1

Species

P.fumigata

Unique Gene ID

Phfumi.g00008884

Gene Model ID

Phfumi.CG.MTP2014.S11956.g08884

Location

S11956:3371..5378

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S11956.g08884.01.t
Phfumi.CG.MTP2014.S11956.g08884.02.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
BBP/SF1 PANTHER BBP/SF1 family
Znf_CCHC SMART Zinc finger, CCHC-type
Znf_CCHC ProSiteProfiles Zinc finger, CCHC-type
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
Znf_CCHC_sf SUPERFAMILY Zinc finger, CCHC-type superfamily

GOSlim

22 results

GO Term Annotation Origin Type
mRNA splicing, via spliceosome Orthology biological process
nucleic acid binding Orthology molecular function
transcription corepressor activity Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
ribosome Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
mRNA processing Orthology biological process
zinc ion binding Orthology molecular function
RNA splicing Orthology biological process
nuclear body Orthology cellular component
identical protein binding Orthology molecular function
metal ion binding Orthology molecular function
negative regulation of nucleic acid-templated transcription Orthology biological process
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
reproductive process Orthology biological process
multicellular organism development Orthology biological process
negative regulation of cell proliferation Orthology biological process

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
spliceosomal complex assembly Hs biological process
mRNA 3'-splice site recognition Hs biological process
mRNA splicing, via spliceosome Hs biological process
nucleic acid binding Hs molecular function
transcription corepressor activity Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
ribosome Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
mRNA processing Hs biological process
zinc ion binding Hs molecular function
RNA splicing Hs biological process
nuclear body Hs cellular component
male sex determination Hs biological process
identical protein binding Hs molecular function
pre-mRNA branch point binding Hs molecular function
metal ion binding Hs molecular function
negative regulation of smooth muscle cell proliferation Hs biological process
negative regulation of nucleic acid-templated transcription Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleic acid binding Hs molecular function 215 5.72e-63
transcription corepressor activity Hs molecular function 215 5.72e-63
RNA binding Hs molecular function 215 5.72e-63
protein binding Hs molecular function 215 5.72e-63
nucleus Hs cellular component 215 5.72e-63
nucleoplasm Hs cellular component 215 5.72e-63
spliceosomal complex Hs cellular component 215 5.72e-63
ribosome Hs cellular component 215 5.72e-63
zinc ion binding Hs molecular function 215 5.72e-63
nuclear body Hs cellular component 215 5.72e-63
identical protein binding Hs molecular function 215 5.72e-63
pre-mRNA branch point binding Hs molecular function 215 5.72e-63
metal ion binding Hs molecular function 215 5.72e-63

GO (InterProScan)

5 results

GO Term Analysis Type e-value
mRNA splicing, via spliceosome PANTHER biological process 8.3E-66
nucleic acid binding SUPERFAMILY molecular function 6.98E-5
RNA binding PANTHER molecular function 8.3E-66
zinc ion binding SUPERFAMILY molecular function 6.98E-5
pre-mRNA branch point binding PANTHER molecular function 8.3E-66

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