Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
SANT_dom	ProSiteProfiles	SANT domain
SANT/Myb	CDD	SANT/Myb domain
N-CoR_GPS2_interact	Pfam	N-CoR, GPS2-interacting domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
SANT/Myb	SMART	SANT/Myb domain

GOSlim

36 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription corepressor activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
transcription factor binding	Orthology	molecular function
membrane	Orthology	cellular component
nuclear body	Orthology	cellular component
macromolecular complex	Orthology	cellular component
transcription regulatory region DNA binding	Orthology	molecular function
protein N-terminus binding	Orthology	molecular function
nucleoplasm part	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
receptor binding	Orthology	molecular function
microtubule	Orthology	cellular component
organelle organization	Orthology	biological process
organic substance metabolic process	Orthology	biological process
response to lipid	Orthology	biological process
enzyme binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
cellular response to stress	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
protein phosphorylation	Orthology	biological process
microtubule-based process	Orthology	biological process
hydrolase activity	Blast	molecular function
cellular protein modification process	Blast	biological process

GO (Orthology)

39 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
histone deacetylase complex	Hs	cellular component
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
chromatin	Hs	cellular component
nuclear chromatin	Hs	cellular component
RNA polymerase II regulatory region DNA binding	Hs	molecular function
RNA polymerase II activating transcription factor binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription corepressor activity	Hs	molecular function
Notch binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
spindle microtubule	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
circadian rhythm	Hs	biological process
transcription factor binding	Hs	molecular function
membrane	Hs	cellular component
nuclear matrix	Hs	cellular component
Sin3 complex	Hs	cellular component
nuclear body	Hs	cellular component
ligand-dependent nuclear receptor binding	Hs	molecular function
transcriptional repressor complex	Hs	cellular component
regulation of lipid metabolic process	Hs	biological process
response to estradiol	Hs	biological process
nuclear hormone receptor binding	Hs	molecular function
glucocorticoid receptor binding	Hs	molecular function
histone deacetylase binding	Hs	molecular function
retinoic acid receptor binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
negative regulation of JNK cascade	Hs	biological process
retinoid X receptor binding	Hs	molecular function
thyroid hormone receptor binding	Hs	molecular function
protein N-terminus binding	Hs	molecular function
spindle assembly	Hs	biological process

GO (Blast)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	382	1.02e-117
chromatin	Hs	cellular component	382	1.80e-117
nuclear chromatin	Hs	cellular component	382	1.02e-117
RNA polymerase II regulatory region DNA binding	Hs	molecular function	382	1.80e-117
RNA polymerase II activating transcription factor binding	Hs	molecular function	382	1.02e-117
DNA binding	Hs	molecular function	382	1.02e-117
chromatin binding	Hs	molecular function	382	1.80e-117
transcription corepressor activity	Hs	molecular function	382	1.02e-117
histone deacetylase activity	Hs	molecular function	51.2	1.13e-06
Notch binding	Hs	molecular function	382	1.80e-117
protein binding	Hs	molecular function	382	1.02e-117
nucleus	Hs	cellular component	382	1.02e-117
nucleoplasm	Hs	cellular component	382	1.02e-117
cytoplasm	Hs	cellular component	51.2	1.13e-06
cytosol	Hs	cellular component	382	1.02e-117
spindle microtubule	Hs	cellular component	382	1.02e-117
transcription factor binding	Hs	molecular function	382	1.80e-117
membrane	Hs	cellular component	382	1.02e-117
nuclear matrix	Hs	cellular component	382	1.80e-117
Sin3 complex	Hs	cellular component	382	1.02e-117
nuclear body	Hs	cellular component	382	1.80e-117
ligand-dependent nuclear receptor binding	Hs	molecular function	382	1.02e-117
transcriptional repressor complex	Hs	cellular component	382	1.02e-117
macromolecular complex	Hs	cellular component	51.2	1.13e-06
nuclear hormone receptor binding	Hs	molecular function	382	1.02e-117
glucocorticoid receptor binding	Hs	molecular function	382	1.80e-117
histone deacetylase binding	Hs	molecular function	382	1.02e-117
retinoic acid receptor binding	Hs	molecular function	382	1.80e-117
transcription regulatory region DNA binding	Hs	molecular function	382	1.02e-117
retinoid X receptor binding	Hs	molecular function	382	1.80e-117
thyroid hormone receptor binding	Hs	molecular function	382	1.02e-117
protein N-terminus binding	Hs	molecular function	382	1.80e-117

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
DNA binding	SUPERFAMILY	molecular function	6.22E-13

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location