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  2. Gene 'Phmamm.CG.MTP2014.S4...' > 
  3. Gene 'Boschl.CG.Botznik201...' > 

Gene Card

Best human hits

EXD3; EXOSC10

Species

P.fumigata

Unique Gene ID

Phfumi.g00003647

Gene Model ID

Phfumi.CG.MTP2014.S1379.g03647

Location

S1379:17618..21725

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S1379.g03647.01.t
Phfumi.CG.MTP2014.S1379.g03647.02.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
HRDC_dom Pfam HRDC domain
HRDC_dom SMART HRDC domain
Exosome-assoc_fac_Rrp6_N Pfam Exosome-associated factor Rrp6, N-terminal
RNaseH-like_sf SUPERFAMILY Ribonuclease H-like superfamily
HRDC-like_sf SUPERFAMILY HRDC-like superfamily
3'-5'_exonuclease_dom Pfam 3'-5' exonuclease domain
3'-5'_exonuclease_dom SMART 3'-5' exonuclease domain
HRDC_dom ProSiteProfiles HRDC domain

GOSlim

30 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
nuclear-transcribed mRNA catabolic process Orthology biological process
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
catalytic activity Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
nucleobase-containing compound metabolic process Orthology biological process
RNA processing Orthology biological process
membrane Orthology cellular component
hydrolase activity Orthology molecular function
cellular metabolic process Orthology biological process
metal ion binding Blast molecular function
RNA metabolic process Orthology biological process
nuclear lumen Orthology cellular component
macromolecular complex Orthology cellular component
intracellular part Orthology cellular component
organelle organization Orthology biological process
DNA metabolic process Orthology biological process
transferase activity, transferring phosphorus-containing groups Orthology molecular function
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
RNA catabolic process Orthology biological process
mRNA processing Orthology biological process

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
3'-5'-exoribonuclease activity Hs molecular function
nuclear exosome (RNase complex) Hs cellular component
exosome (RNase complex) Hs cellular component
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
maturation of 5.8S rRNA Hs biological process
nuclear-transcribed mRNA catabolic process Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
catalytic activity Hs molecular function
nuclease activity Hs molecular function
exonuclease activity Hs molecular function
exoribonuclease activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
nucleobase-containing compound metabolic process Hs biological process
rRNA processing Hs biological process
RNA processing Hs biological process
3'-5' exonuclease activity Hs molecular function
membrane Hs cellular component
hydrolase activity Hs molecular function
negative regulation of telomere maintenance via telomerase Hs biological process
transcriptionally active chromatin Hs cellular component
cellular metabolic process Hs biological process
telomerase RNA binding Hs molecular function
nuclear mRNA surveillance Hs biological process
CUT catabolic process Hs biological process
nuclear polyadenylation-dependent rRNA catabolic process Hs biological process
nuclear retention of unspliced pre-mRNA at the site of transcription Hs biological process
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, exonucleolytic Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 568 0.0
3'-5'-exoribonuclease activity Hs molecular function 568 0.0
nuclear exosome (RNase complex) Hs cellular component 568 0.0
exosome (RNase complex) Hs cellular component 568 0.0
nucleic acid binding Hs molecular function 568 0.0
RNA binding Hs molecular function 568 0.0
catalytic activity Hs molecular function 568 0.0
nuclease activity Hs molecular function 568 0.0
exonuclease activity Hs molecular function 568 0.0
exoribonuclease activity Hs molecular function 568 0.0
protein binding Hs molecular function 568 0.0
intracellular Hs cellular component 568 0.0
nucleus Hs cellular component 568 0.0
nucleoplasm Hs cellular component 568 0.0
nucleolus Hs cellular component 568 0.0
cytoplasm Hs cellular component 568 0.0
cytosol Hs cellular component 568 0.0
3'-5' exonuclease activity Hs molecular function 568 0.0
membrane Hs cellular component 568 0.0
hydrolase activity Hs molecular function 568 0.0
transcriptionally active chromatin Hs cellular component 568 0.0
metal ion binding Hs molecular function 42.0 0.002
telomerase RNA binding Hs molecular function 568 0.0

GO (InterProScan)

9 results

GO Term Analysis Type e-value
nucleotide binding SUPERFAMILY molecular function 1.23E-22
nuclear exosome (RNase complex) Pfam cellular component 1.4E-14
nucleic acid binding Pfam molecular function 2.2E-46
catalytic activity SUPERFAMILY molecular function 1.23E-22
intracellular SMART cellular component 9.8E-14
nucleobase-containing compound metabolic process Pfam biological process 2.2E-46
RNA processing Pfam biological process 1.4E-14
3'-5' exonuclease activity Pfam molecular function 2.2E-46
cellular metabolic process SUPERFAMILY biological process 1.23E-22

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