Aniseed - Gene card

Gene Card

Best human hits

BRIP1; RTEL1; RTEL1-TNFRSF6B

Species

P.fumigata

Unique Gene ID

Phfumi.g00003733

Gene Model ID

Phfumi.CG.MTP2014.S1452.g03733

Location

S1452:0..5553

Transcript Models and Sequences

Phfumi.CG.MTP2014.S1452.g03733.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
DEAD_2	Pfam	DEAD2
ATP-dep_Helicase_C	Pfam	ATP-dependent helicase, C-terminal
ATP-dep_Helicase_C	SMART	ATP-dependent helicase, C-terminal

GOSlim

19 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
nucleic acid binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
nucleobase-containing compound metabolic process	InterProScan	biological process
hydrolase activity	Blast	molecular function
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Blast	molecular function
nuclear membrane	Blast	cellular component
metal ion binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
organelle organization	Blast	biological process
nucleoside-triphosphatase activity	Blast	molecular function
cofactor binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	211	6.11e-59
chromosome, telomeric region	Hs	cellular component	211	6.11e-59
nucleic acid binding	Hs	molecular function	211	6.11e-59
DNA binding	Hs	molecular function	211	6.11e-59
chromatin binding	Hs	molecular function	155	2.72e-40
ATP-dependent DNA helicase activity	Hs	molecular function	211	6.11e-59
helicase activity	Hs	molecular function	211	6.11e-59
protein binding	Hs	molecular function	211	6.11e-59
ATP binding	Hs	molecular function	211	6.11e-59
nucleus	Hs	cellular component	211	6.11e-59
nucleoplasm	Hs	cellular component	211	6.11e-59
cytoplasm	Hs	cellular component	155	2.72e-40
ATP-dependent helicase activity	Hs	molecular function	211	6.11e-59
hydrolase activity	Hs	molecular function	211	6.11e-59
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Hs	molecular function	211	6.11e-59
nuclear membrane	Hs	cellular component	155	2.72e-40
metal ion binding	Hs	molecular function	211	6.11e-59
iron-sulfur cluster binding	Hs	molecular function	211	6.11e-59
4 iron, 4 sulfur cluster binding	Hs	molecular function	211	6.11e-59

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	7.6E-53
DNA binding	Pfam	molecular function	2.3E-8
ATP-dependent DNA helicase activity	Pfam	molecular function	2.3E-8
ATP binding	SMART	molecular function	7.6E-53
nucleobase-containing compound metabolic process	SMART	biological process	7.6E-53
ATP-dependent helicase activity	SMART	molecular function	7.6E-53
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	SMART	molecular function	7.6E-53