Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

SLC6A11; SLC6A2; SLC6A4

Species

P.fumigata

Unique Gene ID

Phfumi.g00003770

Gene Model ID

Phfumi.CG.MTP2014.S1478.g03770

Location

S1478:16850..22613

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S1478.g03770.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
SNS_sf SUPERFAMILY Sodium:neurotransmitter symporter superfamily
Na/ntran_symport Pfam Sodium:neurotransmitter symporter
Na/ntran_symport PRINTS Sodium:neurotransmitter symporter
Na/ntran_symport ProSitePatterns Sodium:neurotransmitter symporter
Na/ntran_symport PANTHER Sodium:neurotransmitter symporter
Na/ntran_symport ProSiteProfiles Sodium:neurotransmitter symporter

GOSlim

31 results

GO Term Annotation Origin Type
protein binding Blast molecular function
cytoplasm Blast cellular component
endosome Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
cell surface Blast cellular component
endomembrane system Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
protein homodimerization activity Blast molecular function
cell projection Blast cellular component
neuron projection Blast cellular component
membrane raft Blast cellular component
metal ion binding Blast molecular function
actin filament binding Blast molecular function
transmembrane transport Blast biological process
sodium ion transport Blast biological process
organic substance transport Blast biological process
synapse part Blast cellular component
neuron part Blast cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
cytoskeletal protein binding Blast molecular function
enzyme binding Blast molecular function
cation binding Blast molecular function
heterocyclic compound binding Blast molecular function
organic cyclic compound binding Blast molecular function
binding Blast molecular function
tubulin binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transporter activity Hs molecular function 315 5.31e-101
neurotransmitter:sodium symporter activity Hs molecular function 315 5.31e-101
dopamine:sodium symporter activity Hs molecular function 261 1.43e-80
gamma-aminobutyric acid:sodium symporter activity Hs molecular function 315 5.31e-101
norepinephrine transmembrane transporter activity Hs molecular function 240 1.73e-72
norepinephrine:sodium symporter activity Hs molecular function 240 1.73e-72
serotonin:sodium symporter activity Hs molecular function 261 1.43e-80
protein binding Hs molecular function 261 1.43e-80
cytoplasm Hs cellular component 315 5.31e-101
endosome Hs cellular component 261 1.43e-80
cytosol Hs cellular component 261 1.43e-80
plasma membrane Hs cellular component 315 5.31e-101
integral component of plasma membrane Hs cellular component 315 5.31e-101
monoamine transmembrane transporter activity Hs molecular function 261 1.43e-80
cell surface Hs cellular component 240 1.73e-72
endosome membrane Hs cellular component 261 1.43e-80
endomembrane system Hs cellular component 261 1.43e-80
serotonin transmembrane transporter activity Hs molecular function 261 1.43e-80
symporter activity Hs molecular function 315 5.31e-101
membrane Hs cellular component 315 5.31e-101
integral component of membrane Hs cellular component 315 5.31e-101
myosin binding Hs molecular function 261 1.43e-80
syntaxin-1 binding Hs molecular function 261 1.43e-80
Rab GTPase binding Hs molecular function 261 1.43e-80
cocaine binding Hs molecular function 261 1.43e-80
neurotransmitter binding Hs molecular function 315 5.31e-101
protein homodimerization activity Hs molecular function 261 1.43e-80
cell projection Hs cellular component 315 5.31e-101
neuron projection Hs cellular component 261 1.43e-80
alpha-tubulin binding Hs molecular function 240 1.73e-72
membrane raft Hs cellular component 261 1.43e-80
metal ion binding Hs molecular function 261 1.43e-80
beta-tubulin binding Hs molecular function 240 1.73e-72
nitric-oxide synthase binding Hs molecular function 261 1.43e-80
actin filament binding Hs molecular function 261 1.43e-80
presynapse Hs cellular component 261 1.43e-80

GO (InterProScan)

3 results

GO Term Analysis Type e-value
neurotransmitter:sodium symporter activity PANTHER molecular function 1.4E-148
neurotransmitter transport PANTHER biological process 1.4E-148
integral component of membrane PANTHER cellular component 1.4E-148

Back to Top