Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phfumi.CG.MTP2014.S1...'

Gene Card

Best human hits

CLASRP; SFSWAP

Species

P.fumigata

Unique Gene ID

Phfumi.g00009332

Gene Model ID

Phfumi.CG.MTP2014.S15541.g09332

Location

S15541:1019..2924

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S15541.g09332.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
SWAP_N_domain SMART Suppressor of white apricot N-terminal domain
SWAP_N_domain Pfam Suppressor of white apricot N-terminal domain

GOSlim

6 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
mRNA processing Orthology biological process
RNA splicing Orthology biological process

GO (Orthology)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
mRNA processing Hs biological process
RNA splicing Hs biological process

GO (Blast)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 45.1 4.20e-05
protein binding Hs molecular function 198 2.09e-58
nucleus Hs cellular component 198 2.09e-58
nucleoplasm Hs cellular component 198 2.09e-58

GO (InterProScan)

No result

GO Term Analysis Type e-value