Aniseed - Gene card

>
Gene 'Phfumi.CG.MTP2014.S1...' >
Gene 'Phfumi.CG.MTP2014.S1...'

Gene Card

Best human hits

MPDZ; PATJ; SLC9A3R2

Species

P.fumigata

Unique Gene ID

Phfumi.g00009385

Gene Model ID

Phfumi.CG.MTP2014.S16047.g09385

Location

S16047:145..2893

Transcript Models and Sequences

Phfumi.CG.MTP2014.S16047.g09385.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
RA_dom	Pfam	Ras-associating (RA) domain
PDZ	SMART	PDZ domain
PDZ	ProSiteProfiles	PDZ domain
Ubiquitin-like_domsf	SUPERFAMILY	Ubiquitin-like domain superfamily
PDZ_sf	SUPERFAMILY	PDZ superfamily

GOSlim

30 results

GO Term	Annotation Origin	Type
receptor binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
focal adhesion	Blast	cellular component
protein C-terminus binding	Blast	molecular function
endomembrane system	Blast	cellular component
membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
cell junction	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
cell projection	Blast	cellular component
neuron projection	Blast	cellular component
apical part of cell	Blast	cellular component
synapse	Blast	cellular component
postsynaptic membrane	Blast	cellular component
perinuclear region of cytoplasm	Blast	cellular component
extracellular exosome	Blast	cellular component
signal transduction	InterProScan	biological process
organelle	Blast	cellular component
postsynapse	Blast	cellular component
neuron part	Blast	cellular component
plasma membrane region	Blast	cellular component
enzyme binding	Blast	molecular function
myelin sheath	Blast	cellular component
cell adhesion molecule binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
receptor binding	Hs	molecular function	40.8	0.002
protein binding	Hs	molecular function	41.2	0.002
nucleus	Hs	cellular component	40.8	0.002
cytoplasm	Hs	cellular component	41.2	0.002
centrosome	Hs	cellular component	41.2	0.002
microtubule organizing center	Hs	cellular component	41.2	0.002
cytosol	Hs	cellular component	41.2	0.002
plasma membrane	Hs	cellular component	41.2	0.002
bicellular tight junction	Hs	cellular component	41.2	0.002
focal adhesion	Hs	cellular component	40.8	0.002
beta-catenin binding	Hs	molecular function	40.8	0.002
protein C-terminus binding	Hs	molecular function	40.8	0.002
endomembrane system	Hs	cellular component	40.8	0.002
postsynaptic density	Hs	cellular component	40.0	0.004
membrane	Hs	cellular component	41.2	0.002
apical plasma membrane	Hs	cellular component	41.2	0.002
apicolateral plasma membrane	Hs	cellular component	40.0	0.004
phosphatase binding	Hs	molecular function	40.8	0.002
cell junction	Hs	cellular component	41.2	0.002
dendrite	Hs	cellular component	40.0	0.004
cytoplasmic vesicle	Hs	cellular component	40.0	0.004
protein complex scaffold activity	Hs	molecular function	40.8	0.002
cell projection	Hs	cellular component	40.0	0.004
neuron projection	Hs	cellular component	40.0	0.004
Schmidt-Lanterman incisure	Hs	cellular component	40.0	0.004
apical part of cell	Hs	cellular component	41.2	0.002
synapse	Hs	cellular component	40.0	0.004
postsynaptic membrane	Hs	cellular component	40.0	0.004
cadherin binding	Hs	molecular function	40.8	0.002
perinuclear region of cytoplasm	Hs	cellular component	41.2	0.002
extracellular exosome	Hs	cellular component	41.2	0.002

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	1.6E-9
signal transduction	Pfam	biological process	1.9E-4