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  2. Gene 'Haaura.CG.MTP2014.S3...' > 

Gene Card

Best human hits

DDX58; DHX58; IFIH1

Species

P.fumigata

Unique Gene ID

Phfumi.g00009689

Gene Model ID

Phfumi.CG.MTP2014.S19537.g09689

Location

S19537:435..2826

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S19537.g09689.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
RLR_CTR ProSiteProfiles RIG-I-like receptor, C-terminal regulatory domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
RLR_C_sf Gene3D RIG-I-like receptor, C-terminal domain superfamily
Helicase_C SMART Helicase, C-terminal
Helicase_C CDD Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
RLR_CTR Pfam RIG-I-like receptor, C-terminal regulatory domain
Helicase_C Pfam Helicase, C-terminal

GOSlim

33 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
immune system process Orthology biological process
nucleic acid binding Orthology molecular function
DNA binding Blast molecular function
double-stranded DNA binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
zinc ion binding Orthology molecular function
positive regulation of gene expression Orthology biological process
membrane Orthology cellular component
hydrolase activity Orthology molecular function
cell junction Orthology cellular component
ubiquitin protein ligase binding Orthology molecular function
identical protein binding Orthology molecular function
cell projection Orthology cellular component
innate immune response Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
defense response Orthology biological process
nucleoside-triphosphatase activity Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
cell migration Orthology biological process
cell projection membrane Orthology cellular component
cell leading edge Orthology cellular component
response to organic substance Orthology biological process
transcription factor activity, sequence-specific DNA binding Orthology molecular function
macromolecular complex binding Blast molecular function

GO (Orthology)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
positive regulation of defense response to virus by host Hs biological process
immune system process Hs biological process
nucleic acid binding Hs molecular function
double-stranded DNA binding Hs molecular function
RNA binding Hs molecular function
double-stranded RNA binding Hs molecular function
single-stranded RNA binding Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
bicellular tight junction Hs cellular component
zinc ion binding Hs molecular function
detection of virus Hs biological process
response to virus Hs biological process
positive regulation of gene expression Hs biological process
actin cytoskeleton Hs cellular component
membrane Hs cellular component
viral process Hs biological process
protein deubiquitination Hs biological process
hydrolase activity Hs molecular function
cell junction Hs cellular component
regulation of cell migration Hs biological process
ubiquitin protein ligase binding Hs molecular function
negative regulation of type I interferon production Hs biological process
ruffle membrane Hs cellular component
identical protein binding Hs molecular function
positive regulation of transcription factor import into nucleus Hs biological process
cell projection Hs cellular component
response to exogenous dsRNA Hs biological process
innate immune response Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
positive regulation of sequence-specific DNA binding transcription factor activity Hs biological process
defense response to virus Hs biological process

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 108 9.92e-27
nucleic acid binding Hs molecular function 108 9.92e-27
DNA binding Hs molecular function 107 3.25e-26
double-stranded DNA binding Hs molecular function 108 9.92e-27
RNA binding Hs molecular function 108 9.92e-27
double-stranded RNA binding Hs molecular function 108 9.92e-27
single-stranded RNA binding Hs molecular function 108 9.92e-27
helicase activity Hs molecular function 108 9.92e-27
protein binding Hs molecular function 108 9.92e-27
ATP binding Hs molecular function 108 9.92e-27
nucleus Hs cellular component 107 3.25e-26
cytoplasm Hs cellular component 108 9.92e-27
cytosol Hs cellular component 108 9.92e-27
cytoskeleton Hs cellular component 108 9.92e-27
plasma membrane Hs cellular component 108 9.92e-27
bicellular tight junction Hs cellular component 108 9.92e-27
zinc ion binding Hs molecular function 108 9.92e-27
actin cytoskeleton Hs cellular component 108 9.92e-27
membrane Hs cellular component 108 9.92e-27
hydrolase activity Hs molecular function 108 9.92e-27
cell junction Hs cellular component 108 9.92e-27
ubiquitin protein ligase binding Hs molecular function 108 9.92e-27
ruffle membrane Hs cellular component 108 9.92e-27
identical protein binding Hs molecular function 108 9.92e-27
cell projection Hs cellular component 108 9.92e-27
ribonucleoprotein complex binding Hs molecular function 107 3.25e-26
metal ion binding Hs molecular function 108 9.92e-27

GO (InterProScan)

No result

GO Term Analysis Type e-value

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