Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
Cpn60/TCP-1	Pfam	Chaperonin Cpn60/TCP-1 family
GroEL-like_apical_dom_sf	Gene3D	GroEL-like apical domain superfamily
Chap_CCT_eta	CDD	T-complex protein 1, eta subunit
TCP-1-like_intermed_sf	SUPERFAMILY	TCP-1-like chaperonin intermediate domain superfamily
Chaperone_TCP-1	PRINTS	Chaperone tailless complex polypeptide 1 (TCP-1)
GROEL-like_equatorial_sf	Gene3D	GroEL-like equatorial domain superfamily
GROEL-like_equatorial_sf	SUPERFAMILY	GroEL-like equatorial domain superfamily
Chaperonin_TCP-1_CS	ProSitePatterns	Chaperonin TCP-1, conserved site
Chap_CCT_eta	PANTHER	T-complex protein 1, eta subunit
GroEL-like_apical_dom_sf	SUPERFAMILY	GroEL-like apical domain superfamily
Chap_CCT_eta	TIGRFAM	T-complex protein 1, eta subunit
TCP-1-like_intermed_sf	Gene3D	TCP-1-like chaperonin intermediate domain superfamily

GOSlim

31 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Blast	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
Golgi apparatus	Blast	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
microtubule	Orthology	cellular component
plasma membrane	Blast	cellular component
protein folding	Orthology	biological process
ubiquitin protein ligase binding	Blast	molecular function
identical protein binding	Orthology	molecular function
myelin sheath	Blast	cellular component
cell body	Orthology	cellular component
unfolded protein binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
macromolecular complex	Orthology	cellular component
sexual reproduction	Orthology	biological process
cellular process	Orthology	biological process
organelle organization	Orthology	biological process
DNA metabolic process	Orthology	biological process
transferase activity, transferring phosphorus-containing groups	Orthology	molecular function
intracellular organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
nuclear lumen	Blast	cellular component

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
zona pellucida receptor complex	Hs	cellular component
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
chaperonin-containing T-complex	Hs	cellular component
microtubule	Hs	cellular component
protein folding	Hs	biological process
'de novo' protein folding	Hs	biological process
binding of sperm to zona pellucida	Hs	biological process
positive regulation of telomere maintenance via telomerase	Hs	biological process
protein refolding	Hs	biological process
identical protein binding	Hs	molecular function
protein binding involved in protein folding	Hs	molecular function
cell body	Hs	cellular component
protein stabilization	Hs	biological process
unfolded protein binding	Hs	molecular function
chaperone-mediated protein folding	Hs	biological process
extracellular exosome	Hs	cellular component
toxin transport	Hs	biological process
positive regulation of telomerase RNA localization to Cajal body	Hs	biological process

GO (Blast)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	853	0.0
pericentriolar material	Hs	cellular component	309	1.37e-98
heterochromatin	Hs	cellular component	309	1.37e-98
acrosomal vesicle	Hs	cellular component	309	1.37e-98
zona pellucida receptor complex	Hs	cellular component	853	0.0
RNA binding	Hs	molecular function	309	1.37e-98
protein binding	Hs	molecular function	853	0.0
ATP binding	Hs	molecular function	853	0.0
nuclear heterochromatin	Hs	cellular component	309	1.37e-98
cytoplasm	Hs	cellular component	853	0.0
mitochondrion	Hs	cellular component	853	0.0
Golgi apparatus	Hs	cellular component	309	1.37e-98
centrosome	Hs	cellular component	309	1.37e-98
microtubule organizing center	Hs	cellular component	309	1.37e-98
cytosol	Hs	cellular component	853	0.0
chaperonin-containing T-complex	Hs	cellular component	853	0.0
cytoskeleton	Hs	cellular component	309	1.37e-98
microtubule	Hs	cellular component	853	0.0
plasma membrane	Hs	cellular component	290	2.46e-91
ubiquitin protein ligase binding	Hs	molecular function	309	1.37e-98
identical protein binding	Hs	molecular function	853	0.0
myelin sheath	Hs	cellular component	309	1.37e-98
protein binding involved in protein folding	Hs	molecular function	853	0.0
cell body	Hs	cellular component	853	0.0
unfolded protein binding	Hs	molecular function	853	0.0
extracellular exosome	Hs	cellular component	853	0.0

GO (InterProScan)

3 results

GO Term	Analysis	Type
ATP binding	CDD	molecular function
protein folding	CDD	biological process
unfolded protein binding	CDD	molecular function

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location