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GENE CARD

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Gene Card

Best human hits

LRGUK; LRRC23; LRRC49

Species

P.fumigata

Unique Gene ID

Phfumi.g00001511

Gene Model ID

Phfumi.CG.MTP2014.S242.g01511

Location

S242:19607..22093

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Leu-rich_rpt ProSiteProfiles Leucine-rich repeat
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Leu-rich_rpt_typical-subtyp SMART Leucine-rich repeat, typical subtype

GOSlim

13 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Orthology molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
cytoskeleton Blast cellular component
microtubule Blast cellular component
kinase activity Blast molecular function
transferase activity Blast molecular function
cytoplasmic vesicle Blast cellular component
cell projection Blast cellular component
endomembrane system Blast cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 122 8.12e-31
acrosomal vesicle Hs cellular component 122 8.12e-31
manchette Hs cellular component 122 8.12e-31
protein binding Hs molecular function 314 2.03e-106
ATP binding Hs molecular function 122 8.12e-31
cytoplasm Hs cellular component 122 8.12e-31
cytoskeleton Hs cellular component 122 8.12e-31
microtubule Hs cellular component 70.1 3.29e-13
kinase activity Hs molecular function 122 8.12e-31
transferase activity Hs molecular function 122 8.12e-31
cytoplasmic vesicle Hs cellular component 122 8.12e-31
cell projection Hs cellular component 122 8.12e-31

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding ProSiteProfiles molecular function 4.501