Aniseed - Gene card

Gene Card

Best human hits

NFRKB

Species

P.fumigata

Unique Gene ID

Phfumi.g00005389

Gene Model ID

Phfumi.CG.MTP2014.S3055.g05389

Location

S3055:4768..13320

Transcript Models and Sequences

Phfumi.CG.MTP2014.S3055.g05389.01.t
Phfumi.CG.MTP2014.S3055.g05389.02.t
Phfumi.CG.MTP2014.S3055.g05389.03.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
NFRKB	PANTHER	Nuclear factor related to kappa-B-binding protein
NFRKB_winged_dom	Pfam	NFRKB winged helix-like domain
NFRKB_winged_sf	Gene3D	NFRKB winged helix-like domain superfamily

GOSlim

16 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
DNA repair	Orthology	biological process
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
enzyme binding	Orthology	molecular function
DNA metabolic process	Orthology	biological process
defense response	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
macromolecular complex	Orthology	cellular component

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protease binding	Hs	molecular function
DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
DNA repair	Hs	biological process
DNA recombination	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
inflammatory response	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
protein deubiquitination	Hs	biological process
Ino80 complex	Hs	cellular component

GO (Blast)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protease binding	Hs	molecular function	194	3.04e-51
DNA binding	Hs	molecular function	194	3.04e-51
protein binding	Hs	molecular function	194	3.04e-51
nucleus	Hs	cellular component	194	3.04e-51
nucleoplasm	Hs	cellular component	194	3.04e-51
Ino80 complex	Hs	cellular component	194	3.04e-51

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
Ino80 complex	PANTHER	cellular component	1.9E-105