Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

VIRMA

Species

P.fumigata

Unique Gene ID

Phfumi.g00001708

Gene Model ID

Phfumi.CG.MTP2014.S306.g01708

Location

S306:24357..31917

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
VIR_N Pfam Virilizer, N-terminal
Virilizer PANTHER Protein virilizer

GOSlim

12 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytosol Orthology cellular component
mRNA processing Orthology biological process
RNA splicing Orthology biological process
nuclear body Orthology cellular component
nuclear speck Orthology cellular component
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
mRNA metabolic process Orthology biological process

GO (Orthology)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA binding Hs molecular function
binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytosol Hs cellular component
mRNA processing Hs biological process
RNA splicing Hs biological process
nuclear body Hs cellular component
nuclear speck Hs cellular component
RNA N6-methyladenosine methyltransferase complex Hs cellular component
mRNA methylation Hs biological process

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 103 7.09e-22
binding Hs molecular function 103 7.09e-22
nucleus Hs cellular component 103 7.09e-22
nucleoplasm Hs cellular component 103 7.09e-22
cytosol Hs cellular component 103 7.09e-22
nuclear body Hs cellular component 103 7.09e-22
nuclear speck Hs cellular component 103 7.09e-22
RNA N6-methyladenosine methyltransferase complex Hs cellular component 103 7.09e-22

GO (InterProScan)

No result

GO Term Analysis Type e-value