Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

TRMT1; TRMT1L

Species

P.fumigata

Unique Gene ID

Phfumi.g00005416

Gene Model ID

Phfumi.CG.MTP2014.S3085.g05416

Location

S3085:2483..3797

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S3085.g05416.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Trm1 Pfam tRNA methyltransferase, Trm1
SAM-dependent_MTases SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferase
Trm1 ProSiteProfiles tRNA methyltransferase, Trm1
Trm1 PANTHER tRNA methyltransferase, Trm1

GOSlim

10 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
mitochondrion Blast cellular component
transferase activity Orthology molecular function
metal ion binding Orthology molecular function
RNA processing Orthology biological process
metabolic process Orthology biological process

GO (Orthology)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
tRNA binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
tRNA (guanine-N2-)-methyltransferase activity Hs molecular function
behavior Hs biological process
tRNA processing Hs biological process
methyltransferase activity Hs molecular function
transferase activity Hs molecular function
tRNA methylation Hs biological process
methylation Hs biological process
metal ion binding Hs molecular function

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 173 2.28e-47
nucleic acid binding Hs molecular function 173 2.28e-47
RNA binding Hs molecular function 173 2.28e-47
tRNA (guanine-N2-)-methyltransferase activity Hs molecular function 173 2.28e-47
protein binding Hs molecular function 92.0 7.26e-20
nucleus Hs cellular component 92.0 7.26e-20
nucleoplasm Hs cellular component 92.0 7.26e-20
mitochondrion Hs cellular component 92.0 7.26e-20
methyltransferase activity Hs molecular function 173 2.28e-47
transferase activity Hs molecular function 173 2.28e-47
metal ion binding Hs molecular function 173 2.28e-47

GO (InterProScan)

3 results

GO Term Analysis Type e-value
RNA binding PANTHER molecular function 2.1E-82
tRNA (guanine-N2-)-methyltransferase activity PANTHER molecular function 2.1E-82
tRNA processing PANTHER biological process 2.1E-82