Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
COPB1	PIRSF	Coatomer beta subunit (COPB1)
COPB1_appendage_platform_dom	Pfam	Coatomer beta subunit, appendage platform domain
Clathrin/coatomer_adapt-like_N	Pfam	Clathrin/coatomer adaptor, adaptin-like, N-terminal
COPB1	PANTHER	Coatomer beta subunit (COPB1)
ARM-like	Gene3D	Armadillo-like helical
ARM-type_fold	SUPERFAMILY	Armadillo-type fold
Coatomer_bsu_C	Pfam	Coatomer beta subunit, C-terminal

GOSlim

33 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
structural molecule activity	Orthology	molecular function
binding	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
lysosomal membrane	Blast	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
intracellular protein transport	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
axon	Blast	cellular component
cytoplasmic vesicle	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
membrane organization	Blast	biological process
postsynapse	Blast	cellular component
cytoplasmic part	Orthology	cellular component
intracellular transport	Orthology	biological process
membrane part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
Golgi apparatus part	Orthology	cellular component
endomembrane system	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
endosome	Blast	cellular component
plasma membrane part	Blast	cellular component
organelle organization	Blast	biological process
cell projection part	Blast	cellular component
synapse part	Blast	cellular component
neuron part	Blast	cellular component

GO (Orthology)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
structural molecule activity	Hs	molecular function
binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component
Golgi apparatus	Hs	cellular component
Golgi-associated vesicle	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
intracellular protein transport	Hs	biological process
ER to Golgi vesicle-mediated transport	Hs	biological process
retrograde vesicle-mediated transport, Golgi to ER	Hs	biological process
intra-Golgi vesicle-mediated transport	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
viral process	Hs	biological process
vesicle-mediated transport	Hs	biological process
membrane coat	Hs	cellular component
COPI vesicle coat	Hs	cellular component
transport vesicle	Hs	cellular component
COPI-coated vesicle	Hs	cellular component
COPI-coated vesicle membrane	Hs	cellular component
secretory granule membrane	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
intracellular membrane-bounded organelle	Hs	cellular component
tertiary granule membrane	Hs	cellular component
ficolin-1-rich granule membrane	Hs	cellular component

GO (Blast)

43 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	1368	0.0
signal sequence binding	Hs	molecular function	61.6	1.70e-09
structural molecule activity	Hs	molecular function	1368	0.0
transporter activity	Hs	molecular function	80.9	2.36e-15
binding	Hs	molecular function	1368	0.0
protein binding	Hs	molecular function	1368	0.0
cytoplasm	Hs	cellular component	1368	0.0
lysosomal membrane	Hs	cellular component	80.9	2.36e-15
endoplasmic reticulum membrane	Hs	cellular component	1368	0.0
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	1368	0.0
Golgi apparatus	Hs	cellular component	1368	0.0
Golgi-associated vesicle	Hs	cellular component	1368	0.0
trans-Golgi network	Hs	cellular component	61.6	1.70e-09
cytosol	Hs	cellular component	1368	0.0
plasma membrane	Hs	cellular component	1368	0.0
clathrin-coated pit	Hs	cellular component	61.6	1.70e-09
endosome membrane	Hs	cellular component	80.9	2.36e-15
membrane	Hs	cellular component	1368	0.0
membrane coat	Hs	cellular component	1368	0.0
clathrin coat	Hs	cellular component	61.6	1.70e-09
AP-2 adaptor complex	Hs	cellular component	61.6	1.70e-09
AP-3 adaptor complex	Hs	cellular component	80.9	2.36e-15
COPI vesicle coat	Hs	cellular component	1368	0.0
clathrin adaptor complex	Hs	cellular component	61.6	1.70e-09
transport vesicle	Hs	cellular component	1368	0.0
COPI-coated vesicle	Hs	cellular component	1368	0.0
clathrin binding	Hs	molecular function	61.6	1.70e-09
axon	Hs	cellular component	80.9	2.36e-15
COPI-coated vesicle membrane	Hs	cellular component	1368	0.0
endocytic vesicle membrane	Hs	cellular component	61.6	1.70e-09
secretory granule membrane	Hs	cellular component	1368	0.0
clathrin-coated endocytic vesicle membrane	Hs	cellular component	61.6	1.70e-09
cytoplasmic vesicle	Hs	cellular component	1368	0.0
clathrin adaptor activity	Hs	molecular function	61.6	1.70e-09
endolysosome membrane	Hs	cellular component	61.6	1.70e-09
terminal bouton	Hs	cellular component	80.9	2.36e-15
intracellular membrane-bounded organelle	Hs	cellular component	1368	0.0
clathrin-coated endocytic vesicle	Hs	cellular component	61.6	1.70e-09
tertiary granule membrane	Hs	cellular component	1368	0.0
postsynapse	Hs	cellular component	80.9	2.36e-15
presynaptic endosome	Hs	cellular component	80.9	2.36e-15
ficolin-1-rich granule membrane	Hs	cellular component	1368	0.0
axon cytoplasm	Hs	cellular component	80.9	2.36e-15

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
structural molecule activity	Pfam	molecular function	4.5E-59
binding	SUPERFAMILY	molecular function	3.13E-76
cytoplasm	PANTHER	cellular component	0.0
intracellular protein transport	PANTHER	biological process	0.0
vesicle-mediated transport	Pfam	biological process	1.3E-109
membrane coat	Pfam	cellular component	1.3E-109
COPI vesicle coat	Pfam	cellular component	4.5E-59

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

Location