Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

MRPL11; ZBTB34; ZBTB37

Species

P.fumigata

Unique Gene ID

Phfumi.g00005769

Gene Model ID

Phfumi.CG.MTP2014.S3518.g05769

Location

S3518:118..10130

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
Ribosomal_L11/L12_N_sf SUPERFAMILY Ribosomal protein L11/L12, N-terminal domain superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Ribosomal_L11_C_sf Gene3D Ribosomal protein L11, C-terminal domain superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type
Ribosomal_L11/L12 PANTHER Ribosomal protein L11/L12
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Ribosomal_L11_C_sf SUPERFAMILY Ribosomal protein L11, C-terminal domain superfamily
Ribosomal_L11/L12 SMART Ribosomal protein L11/L12
Ribosomal_L11/L12_N_sf Gene3D Ribosomal protein L11/L12, N-terminal domain superfamily
Ribosomal_L11/L12 CDD Ribosomal protein L11/L12
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Ribosomal_L11/L12 Hamap Ribosomal protein L11/L12
Ribosomal_L11_N Pfam Ribosomal protein L11, N-terminal
Ribosomal_L11_C Pfam Ribosomal protein L11, C-terminal
Znf_C2H2_type Pfam Zinc finger C2H2-type

GOSlim

12 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
RNA binding Blast molecular function
structural constituent of ribosome Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial inner membrane Blast cellular component
ribosome Blast cellular component
metal ion binding Blast molecular function
mitochondrial matrix Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 59.3 3.62e-09
DNA binding Hs molecular function 59.3 3.62e-09
RNA binding Hs molecular function 123 3.16e-32
structural constituent of ribosome Hs molecular function 123 3.16e-32
protein binding Hs molecular function 123 3.16e-32
nucleus Hs cellular component 59.3 3.62e-09
nucleoplasm Hs cellular component 59.3 3.62e-09
mitochondrion Hs cellular component 123 3.16e-32
mitochondrial inner membrane Hs cellular component 123 3.16e-32
mitochondrial ribosome Hs cellular component 123 3.16e-32
mitochondrial large ribosomal subunit Hs cellular component 123 3.16e-32
ribosome Hs cellular component 123 3.16e-32
rRNA binding Hs molecular function 123 3.16e-32
intracellular ribonucleoprotein complex Hs cellular component 123 3.16e-32
metal ion binding Hs molecular function 59.3 3.62e-09

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.083
structural constituent of ribosome PANTHER molecular function 7.0E-40
ribosome PANTHER cellular component 7.0E-40
translation PANTHER biological process 7.0E-40