Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
KH_dom_type_1_sf	SUPERFAMILY	K Homology domain, type 1 superfamily
RRM_dom	SMART	RNA recognition motif domain
KH_dom_type_1_sf	Gene3D	K Homology domain, type 1 superfamily
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom	Pfam	RNA recognition motif domain
RRM_dom	ProSiteProfiles	RNA recognition motif domain
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
KH_dom_type_1	Pfam	K Homology domain, type 1
KH_dom	SMART	K Homology domain

GOSlim

25 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
anatomical structure morphogenesis	Orthology	biological process
lamellipodium	Orthology	cellular component
axon	Orthology	cellular component
cell projection	Orthology	cellular component
perinuclear region of cytoplasm	Orthology	cellular component
regulation of gene expression	Orthology	biological process
cytoplasmic part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
negative regulation of gene expression	Orthology	biological process
plasma membrane region	Orthology	cellular component
cytoskeletal part	Orthology	cellular component
cell projection part	Orthology	cellular component
postsynapse	Orthology	cellular component
mRNA catabolic process	Orthology	biological process
organic substance transport	Orthology	biological process
developmental process	Orthology	biological process

GO (Orthology)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
mRNA binding	Hs	molecular function
mRNA 3'-UTR binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
RNA localization	Hs	biological process
translation	Hs	biological process
regulation of translation	Hs	biological process
anatomical structure morphogenesis	Hs	biological process
cytoplasmic stress granule	Hs	cellular component
negative regulation of translation	Hs	biological process
lamellipodium	Hs	cellular component
filopodium	Hs	cellular component
axon	Hs	cellular component
dendrite	Hs	cellular component
growth cone	Hs	cellular component
intracellular ribonucleoprotein complex	Hs	cellular component
cell projection	Hs	cellular component
dendritic spine	Hs	cellular component
regulation of mRNA stability	Hs	biological process
translation regulator activity	Hs	molecular function
mRNA 5'-UTR binding	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
mRNA transport	Hs	biological process
CRD-mediated mRNA stability complex	Hs	cellular component
neuronal stem cell population maintenance	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	474	7.09e-162
RNA binding	Hs	molecular function	474	7.09e-162
mRNA binding	Hs	molecular function	474	7.09e-162
mRNA 3'-UTR binding	Hs	molecular function	474	7.09e-162
protein binding	Hs	molecular function	474	7.09e-162
nucleus	Hs	cellular component	474	7.09e-162
nucleoplasm	Hs	cellular component	474	7.09e-162
cytoplasm	Hs	cellular component	474	7.09e-162
cytosol	Hs	cellular component	474	7.09e-162
cytoskeleton	Hs	cellular component	455	9.16e-154
cytoplasmic stress granule	Hs	cellular component	474	7.09e-162
lamellipodium	Hs	cellular component	474	7.09e-162
filopodium	Hs	cellular component	474	7.09e-162
axon	Hs	cellular component	474	7.09e-162
dendrite	Hs	cellular component	474	7.09e-162
growth cone	Hs	cellular component	474	7.09e-162
intracellular ribonucleoprotein complex	Hs	cellular component	474	7.09e-162
cell projection	Hs	cellular component	474	7.09e-162
dendritic spine	Hs	cellular component	474	7.09e-162
translation regulator activity	Hs	molecular function	474	7.09e-162
mRNA 5'-UTR binding	Hs	molecular function	474	7.09e-162
perinuclear region of cytoplasm	Hs	cellular component	474	7.09e-162
CRD-mediated mRNA stability complex	Hs	cellular component	474	7.09e-162

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	6.35E-25
RNA binding	Gene3D	molecular function	2.4E-21

Gene Card

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