Gene Card
Best human hits
PUS1; PUS3; PUSL1
Species
Unique Gene ID
Phfumi.g00006179
Gene Model ID
Phfumi.CG.MTP2014.S4122.g06179
Location
S4122:3823..5350
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| PsdUridine_synth_cat_dom_sf | SUPERFAMILY | Pseudouridine synthase, catalytic domain superfamily |
| PsdUridine_synth_TruA_a/b_dom | Pfam | Pseudouridine synthase I, TruA, alpha/beta domain |
| PsdUridine_synth_TruA | TIGRFAM | Pseudouridine synthase I, TruA |
| PsdUridine_synth_TruA | Hamap | Pseudouridine synthase I, TruA |
| PsdUridine_synth_TruA | PANTHER | Pseudouridine synthase I, TruA |
| PsdUridine_synth_TruA_C | Gene3D | Pseudouridine synthase I, TruA, C-terminal |
GOSlim
11 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| mitochondrion | Blast | cellular component |
| mitochondrial matrix | Blast | cellular component |
| cytosol | Orthology | cellular component |
| intracellular membrane-bounded organelle | Blast | cellular component |
| RNA metabolic process | Orthology | biological process |
| RNA processing | Orthology | biological process |
| catalytic activity | Orthology | molecular function |
| mRNA metabolic process | Orthology | biological process |
GO (Orthology)
12 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| pseudouridine synthesis | Hs | biological process |
| RNA binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| tRNA modification | Hs | biological process |
| tRNA processing | Hs | biological process |
| RNA modification | Hs | biological process |
| pseudouridine synthase activity | Hs | molecular function |
| isomerase activity | Hs | molecular function |
| tRNA pseudouridine synthesis | Hs | biological process |
| mRNA pseudouridine synthesis | Hs | biological process |
GO (Blast)
10 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 244 | 3.23e-75 |
| pseudouridylate synthase activity | Hs | molecular function | 50.8 | 1.18e-06 |
| nucleus | Hs | cellular component | 244 | 3.23e-75 |
| cytoplasm | Hs | cellular component | 244 | 3.23e-75 |
| mitochondrion | Hs | cellular component | 50.8 | 1.18e-06 |
| mitochondrial matrix | Hs | cellular component | 50.8 | 1.18e-06 |
| cytosol | Hs | cellular component | 244 | 3.23e-75 |
| pseudouridine synthase activity | Hs | molecular function | 244 | 3.23e-75 |
| isomerase activity | Hs | molecular function | 244 | 3.23e-75 |
| intracellular membrane-bounded organelle | Hs | cellular component | 64.3 | 3.12e-11 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| pseudouridine synthesis | PANTHER | biological process | 3.0E-120 |
| RNA binding | PANTHER | molecular function | 3.0E-120 |
| RNA modification | PANTHER | biological process | 3.0E-120 |
| pseudouridine synthase activity | PANTHER | molecular function | 3.0E-120 |
