Aniseed - Gene card

Gene Card

Best human hits

RPAP3; SPAG1; TOMM34

Species

P.fumigata

Unique Gene ID

Phfumi.g00000668

Gene Model ID

Phfumi.CG.MTP2014.S51.g00668

Location

S51:79637..87234

Transcript Models and Sequences

Phfumi.CG.MTP2014.S51.g00668.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
RPAP3-like_C	Pfam	RNA-polymerase II-associated protein 3-like, C-terminal domain
TPR_repeat	ProSiteProfiles	Tetratricopeptide repeat
TPR_repeat	SMART	Tetratricopeptide repeat
TPR-contain_dom	ProSiteProfiles	Tetratricopeptide repeat-containing domain
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily
TPR_repeat	Pfam	Tetratricopeptide repeat

GOSlim

16 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein binding	Orthology	molecular function
GTP binding	Orthology	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
cytosol	Orthology	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
hydrolase activity	Orthology	molecular function
sexual reproduction	Orthology	biological process
whole membrane	Blast	cellular component
mitochondrial membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
protein binding	Hs	molecular function
GTP binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
single fertilization	Hs	biological process
hydrolase activity	Hs	molecular function
axonemal dynein complex assembly	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	245	1.21e-67
protein binding	Hs	molecular function	245	1.21e-67
GTP binding	Hs	molecular function	245	1.21e-67
nucleus	Hs	cellular component	193	8.88e-55
nucleoplasm	Hs	cellular component	193	8.88e-55
cytoplasm	Hs	cellular component	245	1.21e-67
mitochondrion	Hs	cellular component	193	8.88e-55
mitochondrial outer membrane	Hs	cellular component	193	8.88e-55
cytosol	Hs	cellular component	245	1.21e-67
membrane	Hs	cellular component	193	8.88e-55
integral component of membrane	Hs	cellular component	193	8.88e-55
hydrolase activity	Hs	molecular function	245	1.21e-67
heat shock protein binding	Hs	molecular function	193	8.88e-55
R2TP complex	Hs	cellular component	97.1	2.10e-20

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	7.8E-36