Aniseed - Gene card

Gene Card

Best human hits

NLRP1; NLRP12; NLRP3

Species

P.fumigata

Unique Gene ID

Phfumi.g00002230

Gene Model ID

Phfumi.CG.MTP2014.S517.g02230

Location

S517:32209..33193

Transcript Models and Sequences

Phfumi.CG.MTP2014.S517.g02230.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
NACHT_NTPase	Pfam	NACHT nucleoside triphosphatase

GOSlim

20 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
extracellular region	Blast	cellular component
intracellular	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
cytosol	Blast	cellular component
transcription factor binding	Blast	molecular function
enzyme binding	Blast	molecular function
identical protein binding	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function
endopeptidase activity	Blast	molecular function
enzyme activator activity	Blast	molecular function
positive regulation of hydrolase activity	Blast	biological process
positive regulation of apoptotic process	Blast	biological process
carbohydrate derivative binding	Blast	molecular function
macromolecular complex	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	61.2	2.79e-10
protein binding	Hs	molecular function	61.2	2.79e-10
ATP binding	Hs	molecular function	61.2	2.79e-10
extracellular region	Hs	cellular component	61.2	2.79e-10
intracellular	Hs	cellular component	58.5	2.51e-09
nucleus	Hs	cellular component	61.2	2.79e-10
nucleoplasm	Hs	cellular component	58.5	2.51e-09
cytoplasm	Hs	cellular component	61.2	2.79e-10
endoplasmic reticulum	Hs	cellular component	61.2	2.79e-10
cytosol	Hs	cellular component	61.2	2.79e-10
transcription factor binding	Hs	molecular function	61.2	2.79e-10
cysteine-type endopeptidase activator activity involved in apoptotic process	Hs	molecular function	58.5	2.51e-09
enzyme binding	Hs	molecular function	58.5	2.51e-09
protein domain specific binding	Hs	molecular function	58.5	2.51e-09
identical protein binding	Hs	molecular function	61.2	2.79e-10
peptidoglycan binding	Hs	molecular function	61.2	2.79e-10
sequence-specific DNA binding	Hs	molecular function	61.2	2.79e-10
inflammasome complex	Hs	cellular component	61.2	2.79e-10
NLRP1 inflammasome complex	Hs	cellular component	58.5	2.51e-09
NLRP3 inflammasome complex	Hs	cellular component	61.2	2.79e-10

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value