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GENE CARD

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Gene Card

Best human hits

HMGB1; HMGB2; HMGB3

Species

P.fumigata

Unique Gene ID

Phfumi.g00006794

Gene Model ID

Phfumi.CG.MTP2014.S5204.g06794

Location

S5204:9337..10307

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S5204.g06794.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
HMG_box_dom SMART High mobility group box domain
HMG_box_dom_sf Gene3D High mobility group box domain superfamily
HMG_box_dom_sf SUPERFAMILY High mobility group box domain superfamily
HMG_box_dom ProSiteProfiles High mobility group box domain
HMG_box_dom Pfam High mobility group box domain

GOSlim

48 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
double-stranded DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
RNA binding Blast molecular function
integrin binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cell Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
endosome Blast cellular component
early endosome Blast cellular component
plasma membrane Blast cellular component
chemotaxis Blast biological process
transcription factor binding Blast molecular function
cell surface Blast cellular component
membrane Blast cellular component
macromolecular complex Blast cellular component
neuron projection Blast cellular component
transcription regulatory region DNA binding Blast molecular function
perinuclear region of cytoplasm Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
transcription regulatory region sequence-specific DNA binding Blast molecular function
carbohydrate derivative binding Blast molecular function
anion binding Blast molecular function
receptor binding Blast molecular function
molecular function regulator Blast molecular function
regulation of signal transduction Blast biological process
signaling receptor activity Blast molecular function
cytoplasmic part Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
binding Blast molecular function
protein kinase binding Blast molecular function
protein kinase activity Blast molecular function
regulation of cellular metabolic process Blast biological process
enzyme regulator activity Blast molecular function
catalytic activity Blast molecular function
enzyme activator activity Blast molecular function
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component
plasma membrane part Blast cellular component
enzyme binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
four-way junction DNA binding Hs molecular function 176 2.94e-56
bubble DNA binding Hs molecular function 176 2.94e-56
nuclear chromatin Hs cellular component 168 5.04e-53
condensed chromosome Hs cellular component 176 2.94e-56
enhancer sequence-specific DNA binding Hs molecular function 168 5.04e-53
lipopolysaccharide binding Hs molecular function 176 2.94e-56
phosphatidylserine binding Hs molecular function 176 2.94e-56
DNA binding Hs molecular function 176 2.94e-56
damaged DNA binding Hs molecular function 176 2.94e-56
double-stranded DNA binding Hs molecular function 176 2.94e-56
single-stranded DNA binding Hs molecular function 176 2.94e-56
transcription factor activity, sequence-specific DNA binding Hs molecular function 176 2.94e-56
RNA binding Hs molecular function 176 2.94e-56
double-stranded RNA binding Hs molecular function 176 2.94e-56
single-stranded RNA binding Hs molecular function 176 2.94e-56
cytokine activity Hs molecular function 176 2.94e-56
integrin binding Hs molecular function 176 2.94e-56
protein binding Hs molecular function 176 2.94e-56
extracellular region Hs cellular component 176 2.94e-56
extracellular space Hs cellular component 176 2.94e-56
cell Hs cellular component 168 5.04e-53
nucleus Hs cellular component 176 2.94e-56
nucleoplasm Hs cellular component 176 2.94e-56
chromosome Hs cellular component 176 2.94e-56
nucleolus Hs cellular component 168 5.04e-53
cytoplasm Hs cellular component 176 2.94e-56
endosome Hs cellular component 176 2.94e-56
early endosome Hs cellular component 176 2.94e-56
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 176 2.94e-56
plasma membrane Hs cellular component 176 2.94e-56
transcription factor binding Hs molecular function 176 2.94e-56
drug binding Hs molecular function 168 5.04e-53
DNA binding, bending Hs molecular function 176 2.94e-56
cell surface Hs cellular component 176 2.94e-56
calcium-dependent protein kinase regulator activity Hs molecular function 176 2.94e-56
membrane Hs cellular component 176 2.94e-56
lyase activity Hs molecular function 176 2.94e-56
transcriptional repressor complex Hs cellular component 176 2.94e-56
protein domain specific binding Hs molecular function 168 5.04e-53
C-X-C chemokine binding Hs molecular function 176 2.94e-56
protein kinase activator activity Hs molecular function 176 2.94e-56
macromolecular complex Hs cellular component 168 5.04e-53
secretory granule lumen Hs cellular component 176 2.94e-56
alphav-beta3 integrin-HMGB1 complex Hs cellular component 176 2.94e-56
chemoattractant activity Hs molecular function 176 2.94e-56
neuron projection Hs cellular component 176 2.94e-56
transcription regulatory region DNA binding Hs molecular function 168 5.04e-53
non-sequence-specific DNA binding, bending Hs molecular function 168 5.04e-53
perinuclear region of cytoplasm Hs cellular component 168 5.04e-53
RAGE receptor binding Hs molecular function 176 2.94e-56
DNA polymerase binding Hs molecular function 176 2.94e-56
repressing transcription factor binding Hs molecular function 176 2.94e-56
supercoiled DNA binding Hs molecular function 176 2.94e-56
ficolin-1-rich granule lumen Hs cellular component 176 2.94e-56

GO (InterProScan)

No result

GO Term Analysis Type e-value

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