Aniseed - Gene card

Gene Card

Best human hits

CTCF; CTCFL; ZNF501

Species

P.fumigata

Unique Gene ID

Phfumi.g00002244

Gene Model ID

Phfumi.CG.MTP2014.S525.g02244

Location

S525:18422..24136

Transcript Models and Sequences

Phfumi.CG.MTP2014.S525.g02244.01.t
Phfumi.CG.MTP2014.S525.g02244.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Znf_C2H2_type	Pfam	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	SMART	Zinc finger C2H2-type
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type

GOSlim

19 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Blast	molecular function
nucleic acid binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
transcription corepressor activity	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
zinc ion binding	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function
transcription regulatory region DNA binding	Blast	molecular function
metal ion binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromosome, centromeric region	Hs	cellular component	198	8.04e-56
condensed chromosome	Hs	cellular component	198	8.04e-56
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	198	8.04e-56
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	198	8.04e-56
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	189	2.01e-52
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	198	8.04e-56
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	198	8.04e-56
nucleic acid binding	Hs	molecular function	198	8.04e-56
DNA binding	Hs	molecular function	198	8.04e-56
chromatin binding	Hs	molecular function	198	8.04e-56
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	198	8.04e-56
transcription corepressor activity	Hs	molecular function	198	8.04e-56
protein binding	Hs	molecular function	198	8.04e-56
nucleus	Hs	cellular component	198	8.04e-56
nucleoplasm	Hs	cellular component	198	8.04e-56
chromosome	Hs	cellular component	198	8.04e-56
nucleolus	Hs	cellular component	198	8.04e-56
cytoplasm	Hs	cellular component	189	2.01e-52
zinc ion binding	Hs	molecular function	198	8.04e-56
histone binding	Hs	molecular function	189	2.01e-52
chromatin insulator sequence binding	Hs	molecular function	198	8.04e-56
sequence-specific DNA binding	Hs	molecular function	198	8.04e-56
transcription regulatory region DNA binding	Hs	molecular function	198	8.04e-56
metal ion binding	Hs	molecular function	198	8.04e-56

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	1.4E-5