Aniseed - Gene card

Gene Card

Best human hits

ACTB; ACTG1; ACTG2

Species

P.fumigata

Unique Gene ID

Phfumi.g00002296

Gene Model ID

Phfumi.CG.MTP2014.S551.g02296

Location

S551:25933..30622

Transcript Models and Sequences

Phfumi.CG.MTP2014.S551.g02296.01.t
Phfumi.CG.MTP2014.S551.g02296.02.t
Phfumi.CG.MTP2014.S551.g02296.03.t
Phfumi.CG.MTP2014.S551.g02296.04.t
Phfumi.CG.MTP2014.S551.g02296.05.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Actin	PANTHER	Actin family
Actin_CS	ProSitePatterns	Actin, conserved site
Actin	SMART	Actin family
Actin	Pfam	Actin family
Actin	PRINTS	Actin family
Actin/actin-like_CS	ProSitePatterns	Actin/actin-like conserved site

GOSlim

40 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
extracellular space	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
focal adhesion	Blast	cellular component
membrane	Blast	cellular component
protein kinase binding	Blast	molecular function
lamellipodium	Blast	cellular component
ubiquitin protein ligase binding	Blast	molecular function
vesicle	Blast	cellular component
macromolecular complex	Blast	cellular component
identical protein binding	Blast	molecular function
myelin sheath	Blast	cellular component
cell body	Blast	cellular component
extracellular exosome	Blast	cellular component
cell periphery	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
organelle organization	Blast	biological process
structural molecule activity	Blast	molecular function
cytoskeletal part	Blast	cellular component
cytoskeletal protein binding	Blast	molecular function
cytoplasmic part	Blast	cellular component
plasma membrane region	Blast	cellular component
cell projection	Blast	cellular component
transcription factor binding	Blast	molecular function
chromatin binding	Blast	molecular function
macromolecular complex binding	Blast	molecular function
DNA binding	Blast	molecular function
nucleoplasm part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

44 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	722
nuclear chromatin	Hs	cellular component	722
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	722
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	722
structural constituent of cytoskeleton	Hs	molecular function	722
protein binding	Hs	molecular function	722
profilin binding	Hs	molecular function	721
ATP binding	Hs	molecular function	722
extracellular space	Hs	cellular component	722
nucleus	Hs	cellular component	722
nucleoplasm	Hs	cellular component	722
cytoplasm	Hs	cellular component	722
cytosol	Hs	cellular component	722
cytoskeleton	Hs	cellular component	722
actin filament	Hs	cellular component	721
plasma membrane	Hs	cellular component	722
focal adhesion	Hs	cellular component	722
actin cytoskeleton	Hs	cellular component	722
membrane	Hs	cellular component	722
kinesin binding	Hs	molecular function	722
protein kinase binding	Hs	molecular function	722
myofibril	Hs	cellular component	721
lamellipodium	Hs	cellular component	710
filopodium	Hs	cellular component	710
intracellular ribonucleoprotein complex	Hs	cellular component	722
Tat protein binding	Hs	molecular function	722
nucleosomal DNA binding	Hs	molecular function	722
ubiquitin protein ligase binding	Hs	molecular function	721
filamentous actin	Hs	cellular component	721
vesicle	Hs	cellular component	722
myosin filament	Hs	cellular component	710
macromolecular complex	Hs	cellular component	722
NuA4 histone acetyltransferase complex	Hs	cellular component	722
cytoplasmic ribonucleoprotein granule	Hs	cellular component	722
identical protein binding	Hs	molecular function	722
myelin sheath	Hs	cellular component	721
cell body	Hs	cellular component	710
phagocytic vesicle	Hs	cellular component	721
nitric-oxide synthase binding	Hs	molecular function	722
extracellular exosome	Hs	cellular component	722
cell periphery	Hs	cellular component	710
blood microparticle	Hs	cellular component	722
dense body	Hs	cellular component	722
structural constituent of postsynaptic actin cytoskeleton	Hs	molecular function	722

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value