Aniseed - Gene card

Gene Card

Best human hits

EFL1; GFM1; GFM2

Species

P.fumigata

Unique Gene ID

Phfumi.g00007304

Gene Model ID

Phfumi.CG.MTP2014.S6296.g07304

Location

S6296:3511..9172

Transcript Models and Sequences

Phfumi.CG.MTP2014.S6296.g07304.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
TF_GTP-bd_dom	ProSiteProfiles	Transcription factor, GTP-binding domain
G_TR_CS	ProSitePatterns	Tr-type G domain, conserved site
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Transl_B-barrel_sf	SUPERFAMILY	Translation protein, beta-barrel domain superfamily
Small_GTP-bd_dom	TIGRFAM	Small GTP-binding protein domain
TF_GTP-bd_dom	Pfam	Transcription factor, GTP-binding domain
EFG_III/V	SUPERFAMILY	EF-G domain III/V-like

GOSlim

11 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
GTPase activity	Orthology	molecular function
protein binding	Orthology	molecular function
GTP binding	Orthology	molecular function
intracellular	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
regulation of gene expression	Orthology	biological process
organelle organization	Orthology	biological process
macromolecular complex binding	Blast	molecular function

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
translation elongation factor activity	Hs	molecular function
GTPase activity	Hs	molecular function
protein binding	Hs	molecular function
GTP binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
translation	Hs	biological process
translational elongation	Hs	biological process
mitochondrial translation	Hs	biological process
ribosome disassembly	Hs	biological process
mitochondrial translational termination	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	401	5.19e-132
RNA binding	Hs	molecular function	241	3.25e-71
translation elongation factor activity	Hs	molecular function	401	5.19e-132
GTPase activity	Hs	molecular function	401	5.19e-132
protein binding	Hs	molecular function	401	5.19e-132
GTP binding	Hs	molecular function	401	5.19e-132
intracellular	Hs	cellular component	241	3.25e-71
mitochondrion	Hs	cellular component	401	5.19e-132
mitochondrial matrix	Hs	cellular component	401	5.19e-132
ribosome binding	Hs	molecular function	92.4	1.67e-19

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
GTPase activity	Pfam	molecular function	1.6E-58
GTP binding	Pfam	molecular function	1.6E-58