Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
TAFII28	CDD	TAFII28-like protein
Histone-fold	Gene3D	Histone-fold
TAFII28	Pfam	TAFII28-like protein
Histone-fold	SUPERFAMILY	Histone-fold

GOSlim

15 results

GO Term	Annotation Origin	Type
transcription coactivator activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
transcription initiation from RNA polymerase II promoter	Orthology	biological process
protein heterodimerization activity	Orthology	molecular function
protein N-terminus binding	Orthology	molecular function
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
receptor binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transcription coactivator activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor TFIID complex	Hs	cellular component
Golgi apparatus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
transcription elongation from RNA polymerase II promoter	Hs	biological process
snRNA transcription from RNA polymerase II promoter	Hs	biological process
vitamin D receptor binding	Hs	molecular function
thyroid hormone receptor binding	Hs	molecular function
protein heterodimerization activity	Hs	molecular function
protein N-terminus binding	Hs	molecular function
RNA polymerase II transcriptional preinitiation complex assembly	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription coactivator activity	Hs	molecular function	95.5	8.18e-26
protein binding	Hs	molecular function	95.5	8.18e-26
nucleus	Hs	cellular component	95.5	8.18e-26
nucleoplasm	Hs	cellular component	95.5	8.18e-26
transcription factor TFIID complex	Hs	cellular component	95.5	8.18e-26
Golgi apparatus	Hs	cellular component	95.5	8.18e-26
vitamin D receptor binding	Hs	molecular function	95.5	8.18e-26
thyroid hormone receptor binding	Hs	molecular function	95.5	8.18e-26
protein heterodimerization activity	Hs	molecular function	95.5	8.18e-26
protein N-terminus binding	Hs	molecular function	95.5	8.18e-26

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleus	CDD	cellular component	7.34868E-24
transcription initiation from RNA polymerase II promoter	CDD	biological process	7.34868E-24
protein heterodimerization activity	Gene3D	molecular function	8.6E-17

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location