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GENE CARD

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Gene Card

Best human hits

SNAI2; ZBTB17; ZNF792

Species

P.fumigata

Unique Gene ID

Phfumi.g00007567

Gene Model ID

Phfumi.CG.MTP2014.S6955.g07567

Location

S6955:401..1550

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S6955.g07567.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type

GOSlim

20 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
transcription factor binding Blast molecular function
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
sequence-specific DNA binding Blast molecular function
metal ion binding Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
transcription regulatory region DNA binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 42.0 1.84e-04
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 41.6 4.13e-04
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 42.0 1.84e-04
core promoter binding Hs molecular function 41.6 4.13e-04
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 41.6 4.13e-04
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 42.0 1.84e-04
transcription coactivator binding Hs molecular function 41.6 4.13e-04
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 41.6 4.13e-04
nucleic acid binding Hs molecular function 42.0 1.84e-04
DNA binding Hs molecular function 42.0 1.84e-04
chromatin binding Hs molecular function 42.0 1.84e-04
transcription factor activity, sequence-specific DNA binding Hs molecular function 41.6 4.13e-04
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 42.0 1.84e-04
protein binding Hs molecular function 42.0 1.84e-04
intracellular Hs cellular component 40.4 8.13e-04
nucleus Hs cellular component 42.0 1.84e-04
nucleoplasm Hs cellular component 42.0 1.84e-04
cytoplasm Hs cellular component 42.0 1.84e-04
transcription factor binding Hs molecular function 41.6 4.13e-04
macromolecular complex Hs cellular component 41.6 4.13e-04
protein-DNA complex Hs cellular component 41.6 4.13e-04
identical protein binding Hs molecular function 40.4 8.13e-04
sequence-specific DNA binding Hs molecular function 42.0 1.84e-04
metal ion binding Hs molecular function 42.0 1.84e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.065