Gene Card
Best human hits
EXD1; EXD3; EXOSC10
Species
Unique Gene ID
Phmamm.g00000420
Gene Model ID
Phmamm.CG.MTP2014.S10.g00420
Location
S10:147986..156400
Transcript Models and Sequences
Phmamm.CG.MTP2014.S10.g00420.01.t
Phmamm.CG.MTP2014.S10.g00420.02.t
AHC0AAA26YB08
Plate: Plate_26_B08
AHC0AAA4YD06
Plate: Plate_4_D06
AHC0AAA6YL03
Plate: Plate_6_L03
AHC0AAA39YF02
Plate: Plate_39_F02
AHC0AAA39YJ07
Plate: Plate_39_J07
AHC0AAA48YP16
Plate: Plate_48_P16
AHC0AAA50YF07
Plate: Plate_50_F07
AHC0AAA53YE11
Plate: Plate_53_E11
AHC0AAA62YD05
Plate: Plate_62_D05
AHC0AAA70YJ09
Plate: Plate_70_J09
AHC0AAA71YP16
Plate: Plate_71_P16
AHC0AAA75YG02
Plate: Plate_75_G02
AHC0AAA140YO01
Plate: Plate_140_O01
AHC0AAA144YA09
Plate: Plate_144_A09
AHC0AAA154YP10
Plate: Plate_154_P10
AHC0AAA217YM10
Plate: Plate_217_M10
AHC0AAA233YJ06
Plate: Plate_233_J06
AHC0AAA244YM05
Plate: Plate_244_M05
AHC0AAA253YJ06
Plate: Plate_253_J06
AHC0AAA264YH08
Plate: Plate_264_H08
AHC0AAA266YP05
Plate: Plate_266_P05
AHC0AAA39YH04
Plate: Plate_39_H04
AHC0AAA39YJ05
Plate: Plate_39_J05
n/a
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IPR Term | Analysis | Definition |
---|---|---|
3'-5'_exonuclease_dom | SMART | 3'-5' exonuclease domain |
HRDC_dom | Pfam | HRDC domain |
HRDC-like_sf | SUPERFAMILY | HRDC-like superfamily |
RNaseH-like_sf | SUPERFAMILY | Ribonuclease H-like superfamily |
HRDC_dom | SMART | HRDC domain |
Exosome-assoc_fac_Rrp6_N | Pfam | Exosome-associated factor Rrp6, N-terminal |
HRDC_dom | ProSiteProfiles | HRDC domain |
3'-5'_exonuclease_dom | Pfam | 3'-5' exonuclease domain |
GO Term | Annotation Origin | Type |
---|---|---|
nucleotide binding | Orthology | molecular function |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
nuclear-transcribed mRNA catabolic process | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
RNA binding | Orthology | molecular function |
catalytic activity | Orthology | molecular function |
protein binding | Orthology | molecular function |
intracellular | Orthology | cellular component |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleolus | Orthology | cellular component |
cytoplasm | Orthology | cellular component |
cytosol | Orthology | cellular component |
nucleobase-containing compound metabolic process | Orthology | biological process |
RNA processing | Orthology | biological process |
membrane | Orthology | cellular component |
hydrolase activity | Orthology | molecular function |
protein homodimerization activity | Blast | molecular function |
cellular metabolic process | Orthology | biological process |
metal ion binding | Blast | molecular function |
RNA metabolic process | Orthology | biological process |
nuclear lumen | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
intracellular part | Orthology | cellular component |
organelle organization | Orthology | biological process |
DNA metabolic process | Orthology | biological process |
transferase activity, transferring phosphorus-containing groups | Orthology | molecular function |
intracellular organelle part | Orthology | cellular component |
intracellular non-membrane-bounded organelle | Orthology | cellular component |
RNA catabolic process | Orthology | biological process |
mRNA processing | Orthology | biological process |
cytoplasmic part | Blast | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
nucleotide binding | Hs | molecular function |
3'-5'-exoribonuclease activity | Hs | molecular function |
nuclear exosome (RNase complex) | Hs | cellular component |
exosome (RNase complex) | Hs | cellular component |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
maturation of 5.8S rRNA | Hs | biological process |
nuclear-transcribed mRNA catabolic process | Hs | biological process |
nucleic acid binding | Hs | molecular function |
RNA binding | Hs | molecular function |
catalytic activity | Hs | molecular function |
nuclease activity | Hs | molecular function |
exonuclease activity | Hs | molecular function |
exoribonuclease activity | Hs | molecular function |
protein binding | Hs | molecular function |
intracellular | Hs | cellular component |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
nucleolus | Hs | cellular component |
cytoplasm | Hs | cellular component |
cytosol | Hs | cellular component |
nucleobase-containing compound metabolic process | Hs | biological process |
rRNA processing | Hs | biological process |
RNA processing | Hs | biological process |
3'-5' exonuclease activity | Hs | molecular function |
membrane | Hs | cellular component |
hydrolase activity | Hs | molecular function |
negative regulation of telomere maintenance via telomerase | Hs | biological process |
transcriptionally active chromatin | Hs | cellular component |
cellular metabolic process | Hs | biological process |
telomerase RNA binding | Hs | molecular function |
nuclear mRNA surveillance | Hs | biological process |
CUT catabolic process | Hs | biological process |
nuclear polyadenylation-dependent rRNA catabolic process | Hs | biological process |
nuclear retention of unspliced pre-mRNA at the site of transcription | Hs | biological process |
nucleic acid phosphodiester bond hydrolysis | Hs | biological process |
RNA phosphodiester bond hydrolysis, exonucleolytic | Hs | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleotide binding | Hs | molecular function | 567 | 0.0 |
3'-5'-exoribonuclease activity | Hs | molecular function | 567 | 0.0 |
nuclear exosome (RNase complex) | Hs | cellular component | 567 | 0.0 |
exosome (RNase complex) | Hs | cellular component | 567 | 0.0 |
nucleic acid binding | Hs | molecular function | 567 | 0.0 |
RNA binding | Hs | molecular function | 567 | 0.0 |
catalytic activity | Hs | molecular function | 567 | 0.0 |
nuclease activity | Hs | molecular function | 567 | 0.0 |
exonuclease activity | Hs | molecular function | 567 | 0.0 |
exoribonuclease activity | Hs | molecular function | 567 | 0.0 |
protein binding | Hs | molecular function | 567 | 0.0 |
intracellular | Hs | cellular component | 567 | 0.0 |
nucleus | Hs | cellular component | 567 | 0.0 |
nucleoplasm | Hs | cellular component | 567 | 0.0 |
nucleolus | Hs | cellular component | 567 | 0.0 |
cytoplasm | Hs | cellular component | 567 | 0.0 |
cytosol | Hs | cellular component | 567 | 0.0 |
3'-5' exonuclease activity | Hs | molecular function | 567 | 0.0 |
membrane | Hs | cellular component | 567 | 0.0 |
hydrolase activity | Hs | molecular function | 567 | 0.0 |
transcriptionally active chromatin | Hs | cellular component | 567 | 0.0 |
protein homodimerization activity | Hs | molecular function | 41.6 | 0.002 |
P granule | Hs | cellular component | 41.6 | 0.002 |
metal ion binding | Hs | molecular function | 43.1 | 6.43e-04 |
telomerase RNA binding | Hs | molecular function | 567 | 0.0 |
PET complex | Hs | cellular component | 41.6 | 0.002 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleotide binding | SUPERFAMILY | molecular function | 1.44E-23 |
nuclear exosome (RNase complex) | Pfam | cellular component | 3.7E-14 |
nucleic acid binding | Pfam | molecular function | 2.3E-46 |
catalytic activity | SUPERFAMILY | molecular function | 1.44E-23 |
intracellular | SMART | cellular component | 1.1E-13 |
nucleobase-containing compound metabolic process | Pfam | biological process | 2.3E-46 |
RNA processing | Pfam | biological process | 3.7E-14 |
3'-5' exonuclease activity | Pfam | molecular function | 2.3E-46 |
cellular metabolic process | SUPERFAMILY | biological process | 1.44E-23 |