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GENE CARD

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Gene Card

Best human hits

ACTA1; ACTA2; ACTC1

Species

P.mammillata

Unique Gene ID

Phmamm.g00013315

Gene Model ID

Phmamm.CG.MTP2014.S1024.g13315

Location

S1024:8410..9889

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1024.g13315.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA61YA07

Plate: Plate_61_A07

AHC0AAA108YD12

Plate: Plate_108_D12

AHC0AAA124YD17

Plate: Plate_124_D17

AHC0AAA89YG22

Plate: Plate_89_G22

AHC0AAA217YE12

Plate: Plate_217_E12

AHC0AAA221YF12

Plate: Plate_221_F12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Actin PRINTS Actin family
Actin_CS ProSitePatterns Actin, conserved site
Actin/actin-like_CS ProSitePatterns Actin/actin-like conserved site
Actin Pfam Actin family
Actin SMART Actin family
Actin PANTHER Actin family

GOSlim

26 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
extracellular space Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
focal adhesion Blast cellular component
membrane Blast cellular component
protein kinase binding Blast molecular function
lamellipodium Blast cellular component
macromolecular complex Blast cellular component
cell body Blast cellular component
extracellular exosome Blast cellular component
cytoskeletal part Blast cellular component
organelle organization Blast biological process
structural molecule activity Blast molecular function
cytoplasmic part Blast cellular component
nucleoside-triphosphatase activity Blast molecular function
cytoskeletal protein binding Blast molecular function
organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
plasma membrane region Blast cellular component
cell projection Blast cellular component
anion binding Blast molecular function
adenyl ribonucleotide binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 763 0.0
stress fiber Hs cellular component 763 0.0
structural constituent of cytoskeleton Hs molecular function 763 0.0
protein binding Hs molecular function 763 0.0
ATP binding Hs molecular function 763 0.0
extracellular space Hs cellular component 763 0.0
cytoplasm Hs cellular component 763 0.0
cytosol Hs cellular component 763 0.0
cytoskeleton Hs cellular component 763 0.0
striated muscle thin filament Hs cellular component 763 0.0
actin filament Hs cellular component 763 0.0
focal adhesion Hs cellular component 763 0.0
actin cytoskeleton Hs cellular component 763 0.0
membrane Hs cellular component 763 0.0
ATPase activity Hs molecular function 763 0.0
myosin binding Hs molecular function 763 0.0
protein kinase binding Hs molecular function 763 0.0
sarcomere Hs cellular component 763 0.0
lamellipodium Hs cellular component 763 0.0
filopodium Hs cellular component 763 0.0
smooth muscle contractile fiber Hs cellular component 763 0.0
I band Hs cellular component 763 0.0
macromolecular complex Hs cellular component 763 0.0
actomyosin, actin portion Hs cellular component 763 0.0
ADP binding Hs molecular function 763 0.0
cell body Hs cellular component 763 0.0
extracellular exosome Hs cellular component 763 0.0
blood microparticle Hs cellular component 763 0.0

GO (InterProScan)

No result

GO Term Analysis Type e-value