Gene Card
Best human hits
GPATCH3; SUGP2; TFIP11
Species
Unique Gene ID
Phmamm.g00013400
Gene Model ID
Phmamm.CG.MTP2014.S1040.g13400
Location
S1040:40181..46062
Transcript Models and Sequences
Genoscope Yasuo Villefranche
1 result
AHC0AAA116YJ01
Plate: Plate_116_J01
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
3 results
| IPR Term | Analysis | Definition |
|---|---|---|
| G_patch_dom | ProSiteProfiles | G-patch domain |
| G_patch_dom | Pfam | G-patch domain |
| G_patch_dom | SMART | G-patch domain |
GOSlim
16 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| transcription, DNA-templated | Orthology | biological process |
| regulation of transcription, DNA-templated | Orthology | biological process |
| nuclear body | Blast | cellular component |
| nuclear speck | Blast | cellular component |
| positive regulation of transcription, DNA-templated | Orthology | biological process |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| nuclear lumen | Blast | cellular component |
| nuclear part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
GO (Orthology)
8 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleic acid binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| transcription, DNA-templated | Hs | biological process |
| regulation of transcription, DNA-templated | Hs | biological process |
| negative regulation of type I interferon production | Hs | biological process |
| positive regulation of transcription, DNA-templated | Hs | biological process |
GO (Blast)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nuclear chromosome, telomeric region | Hs | cellular component | 45.1 | 1.20e-04 |
| nucleic acid binding | Hs | molecular function | 314 | 6.56e-100 |
| RNA binding | Hs | molecular function | 40.4 | 0.003 |
| protein binding | Hs | molecular function | 314 | 6.56e-100 |
| proteinaceous extracellular matrix | Hs | cellular component | 45.1 | 1.20e-04 |
| nucleus | Hs | cellular component | 314 | 6.56e-100 |
| nucleoplasm | Hs | cellular component | 45.1 | 1.20e-04 |
| spliceosomal complex | Hs | cellular component | 45.1 | 1.20e-04 |
| nucleolus | Hs | cellular component | 45.1 | 1.20e-04 |
| cytoplasm | Hs | cellular component | 314 | 6.56e-100 |
| nuclear body | Hs | cellular component | 40.4 | 0.003 |
| nuclear speck | Hs | cellular component | 45.1 | 1.20e-04 |
| U2-type post-mRNA release spliceosomal complex | Hs | cellular component | 45.1 | 1.20e-04 |
| catalytic step 2 spliceosome | Hs | cellular component | 45.1 | 1.20e-04 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | Pfam | molecular function | 2.3E-9 |
| negative regulation of type I interferon production | PANTHER | biological process | 2.1E-153 |
