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GENE CARD

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Gene Card

Best human hits

AEBP2; GLI1; GLI3

Species

P.mammillata

Unique Gene ID

Phmamm.g00003305

Gene Model ID

Phmamm.CG.MTP2014.S105.g03305

Location

S105:162314..169033

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S105.g03305.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA32YK18

Plate: Plate_32_K18

AHC0AAA68YO18

Plate: Plate_68_O18

AHC0AAA115YH10

Plate: Plate_115_H10

AHC0AAA188YH02

Plate: Plate_188_H02

AHC0AAA259YC08

Plate: Plate_259_C08

AHC0AAA263YK03

Plate: Plate_263_K03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

33 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Orthology molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription corepressor activity Orthology molecular function
protein binding Blast molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
microtubule binding Blast molecular function
nuclear speck Blast cellular component
cell projection Blast cellular component
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
metal ion binding Orthology molecular function
organelle organization Orthology biological process
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
negative regulation of gene expression Orthology biological process
organelle Blast cellular component
plasma membrane region Blast cellular component
cell projection part Blast cellular component
microtubule Blast cellular component
cytoplasmic part Blast cellular component
enzyme binding Blast molecular function
organelle part Blast cellular component

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
transcription corepressor activity Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
ESC/E(Z) complex Hs cellular component
negative regulation of gene expression, epigenetic Hs biological process
metal ion binding Hs molecular function

GO (Blast)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 74.3 6.63e-14
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 105 2.73e-24
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 74.3 6.63e-14
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 74.3 6.63e-14
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 105 2.73e-24
nucleic acid binding Hs molecular function 105 2.73e-24
DNA binding Hs molecular function 105 2.73e-24
chromatin binding Hs molecular function 74.3 6.63e-14
transcription factor activity, sequence-specific DNA binding Hs molecular function 74.3 6.63e-14
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 70.5 8.21e-13
transcription corepressor activity Hs molecular function 105 2.73e-24
protein binding Hs molecular function 74.3 6.63e-14
nucleus Hs cellular component 105 2.73e-24
nucleoplasm Hs cellular component 105 2.73e-24
cytoplasm Hs cellular component 74.3 6.63e-14
cytosol Hs cellular component 74.3 6.63e-14
cilium Hs cellular component 74.3 6.63e-14
axoneme Hs cellular component 74.3 6.63e-14
beta-catenin binding Hs molecular function 74.3 6.63e-14
microtubule binding Hs molecular function 70.5 8.21e-13
mediator complex Hs cellular component 74.3 6.63e-14
nuclear speck Hs cellular component 74.3 6.63e-14
transcriptional repressor complex Hs cellular component 74.3 6.63e-14
histone acetyltransferase binding Hs molecular function 74.3 6.63e-14
ESC/E(Z) complex Hs cellular component 105 2.73e-24
histone deacetylase binding Hs molecular function 74.3 6.63e-14
cell projection Hs cellular component 74.3 6.63e-14
sequence-specific DNA binding Hs molecular function 74.3 6.63e-14
transcription regulatory region DNA binding Hs molecular function 70.5 8.21e-13
metal ion binding Hs molecular function 105 2.73e-24
ciliary tip Hs cellular component 74.3 6.63e-14
ciliary base Hs cellular component 74.3 6.63e-14

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.068