Gene Card
Best human hits
COPA; COPB2; PAFAH1B1
Species
Unique Gene ID
Phmamm.g00003457
Gene Model ID
Phmamm.CG.MTP2014.S112.g03457
Location
S112:226490..242108
Transcript Models and Sequences
Genoscope Yasuo Villefranche
11 results
AHC0AAA13YK17
Plate: Plate_13_K17
AHC0AAA13YP08
Plate: Plate_13_P08
AHC0AAA25YJ14
Plate: Plate_25_J14
AHC0AAA25YL21
Plate: Plate_25_L21
AHC0AAA42YJ01
Plate: Plate_42_J01
AHC0AAA58YN03
Plate: Plate_58_N03
AHC0AAA61YO18
Plate: Plate_61_O18
AHC0AAA126YC24
Plate: Plate_126_C24
AHC0AAA183YG08
Plate: Plate_183_G08
AHC0AAA190YD17
Plate: Plate_190_D17
AHC0AAA261YM21
Plate: Plate_261_M21
n/a
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Click here to see the tree inference method
InterPro
11 results
| IPR Term | Analysis | Definition |
|---|---|---|
| WD40_repeat | SMART | WD40 repeat |
| WD40_repeat_dom | ProSiteProfiles | WD40-repeat-containing domain |
| WD40_repeat | ProSiteProfiles | WD40 repeat |
| WD40_repeat | Pfam | WD40 repeat |
| Coatomer_asu_C | Pfam | Coatomer, alpha subunit, C-terminal |
| WD40_repeat_CS | ProSitePatterns | WD40 repeat, conserved site |
| Coatomer_WD-assoc_reg | Pfam | Coatomer, WD associated region |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| G-protein_beta_WD-40_rep | PRINTS | G-protein beta WD-40 repeat |
| Coatomer_asu | PIRSF | Coatomer alpha subunit |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
GOSlim
58 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| Golgi membrane | Orthology | cellular component |
| structural molecule activity | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| extracellular region | Orthology | cellular component |
| extracellular space | Orthology | cellular component |
| nucleus | Blast | cellular component |
| nuclear envelope | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| endoplasmic reticulum membrane | Orthology | cellular component |
| Golgi apparatus | Orthology | cellular component |
| centrosome | Blast | cellular component |
| microtubule organizing center | Blast | cellular component |
| cytosol | Orthology | cellular component |
| cytoskeleton | Blast | cellular component |
| microtubule | Blast | cellular component |
| intracellular protein transport | Orthology | biological process |
| microtubule binding | Blast | molecular function |
| protein transport | Orthology | biological process |
| microtubule cytoskeleton | Blast | cellular component |
| membrane | Orthology | cellular component |
| axon | Blast | cellular component |
| cell leading edge | Blast | cellular component |
| cytoplasmic vesicle | Orthology | cellular component |
| nuclear membrane | Blast | cellular component |
| vesicle | Blast | cellular component |
| protein homodimerization activity | Blast | molecular function |
| neuron projection | Blast | cellular component |
| neuronal cell body | Blast | cellular component |
| perinuclear region of cytoplasm | Blast | cellular component |
| extracellular exosome | Orthology | cellular component |
| receptor binding | Orthology | molecular function |
| molecular function regulator | Orthology | molecular function |
| regulation of signal transduction | Orthology | biological process |
| signaling receptor activity | Orthology | molecular function |
| intracellular transport | Orthology | biological process |
| regulation of molecular function | Orthology | biological process |
| cytoplasmic part | Orthology | cellular component |
| membrane part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| whole membrane | Orthology | cellular component |
| bounding membrane of organelle | Orthology | cellular component |
| Golgi apparatus part | Orthology | cellular component |
| endomembrane system | Orthology | cellular component |
| intracellular organelle part | Orthology | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| cytoskeletal part | Blast | cellular component |
| cell periphery | Blast | cellular component |
| anion binding | Blast | molecular function |
| carbohydrate derivative binding | Blast | molecular function |
| cell projection part | Blast | cellular component |
| organelle | Blast | cellular component |
| cell projection | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| cluster of actin-based cell projections | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| enzyme binding | Blast | molecular function |
| macromolecular complex binding | Blast | molecular function |
GO (Orthology)
24 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| Golgi membrane | Hs | cellular component |
| hormone activity | Hs | molecular function |
| structural molecule activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| extracellular region | Hs | cellular component |
| extracellular space | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| endoplasmic reticulum membrane | Hs | cellular component |
| Golgi apparatus | Hs | cellular component |
| cytosol | Hs | cellular component |
| intracellular protein transport | Hs | biological process |
| ER to Golgi vesicle-mediated transport | Hs | biological process |
| retrograde vesicle-mediated transport, Golgi to ER | Hs | biological process |
| intra-Golgi vesicle-mediated transport | Hs | biological process |
| regulation of receptor activity | Hs | biological process |
| protein transport | Hs | biological process |
| membrane | Hs | cellular component |
| vesicle-mediated transport | Hs | biological process |
| membrane coat | Hs | cellular component |
| COPI vesicle coat | Hs | cellular component |
| transport vesicle | Hs | cellular component |
| COPI-coated vesicle membrane | Hs | cellular component |
| cytoplasmic vesicle | Hs | cellular component |
| extracellular exosome | Hs | cellular component |
GO (Blast)
51 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| Golgi membrane | Hs | cellular component | 1543 | 0.0 |
| astral microtubule | Hs | cellular component | 100 | 3.82e-22 |
| kinetochore | Hs | cellular component | 100 | 3.82e-22 |
| phospholipase A2 activity | Hs | molecular function | 100 | 3.82e-22 |
| hormone activity | Hs | molecular function | 1543 | 0.0 |
| structural molecule activity | Hs | molecular function | 1543 | 0.0 |
| protein binding | Hs | molecular function | 1543 | 0.0 |
| extracellular region | Hs | cellular component | 1543 | 0.0 |
| extracellular space | Hs | cellular component | 1543 | 0.0 |
| nucleus | Hs | cellular component | 100 | 3.82e-22 |
| nuclear envelope | Hs | cellular component | 100 | 3.82e-22 |
| cytoplasm | Hs | cellular component | 1543 | 0.0 |
| endoplasmic reticulum membrane | Hs | cellular component | 1543 | 0.0 |
| Golgi apparatus | Hs | cellular component | 1543 | 0.0 |
| centrosome | Hs | cellular component | 100 | 3.82e-22 |
| microtubule organizing center | Hs | cellular component | 100 | 3.82e-22 |
| spindle | Hs | cellular component | 100 | 3.82e-22 |
| cytosol | Hs | cellular component | 1543 | 0.0 |
| cytoskeleton | Hs | cellular component | 100 | 3.82e-22 |
| kinesin complex | Hs | cellular component | 100 | 3.82e-22 |
| microtubule | Hs | cellular component | 100 | 3.82e-22 |
| microtubule associated complex | Hs | cellular component | 100 | 3.82e-22 |
| cell cortex | Hs | cellular component | 100 | 3.82e-22 |
| microtubule binding | Hs | molecular function | 100 | 3.82e-22 |
| heparin binding | Hs | molecular function | 100 | 3.82e-22 |
| microtubule cytoskeleton | Hs | cellular component | 100 | 3.82e-22 |
| membrane | Hs | cellular component | 1543 | 0.0 |
| membrane coat | Hs | cellular component | 1543 | 0.0 |
| COPI vesicle coat | Hs | cellular component | 1543 | 0.0 |
| transport vesicle | Hs | cellular component | 1543 | 0.0 |
| axon | Hs | cellular component | 100 | 3.82e-22 |
| growth cone | Hs | cellular component | 100 | 3.82e-22 |
| COPI-coated vesicle membrane | Hs | cellular component | 1543 | 0.0 |
| cell leading edge | Hs | cellular component | 100 | 3.82e-22 |
| cytoplasmic vesicle | Hs | cellular component | 1543 | 0.0 |
| motile cilium | Hs | cellular component | 100 | 3.82e-22 |
| nuclear membrane | Hs | cellular component | 100 | 3.82e-22 |
| vesicle | Hs | cellular component | 100 | 3.82e-22 |
| stereocilium | Hs | cellular component | 100 | 3.82e-22 |
| dynactin binding | Hs | molecular function | 100 | 3.82e-22 |
| protein homodimerization activity | Hs | molecular function | 100 | 3.82e-22 |
| neuron projection | Hs | cellular component | 100 | 3.82e-22 |
| neuronal cell body | Hs | cellular component | 100 | 3.82e-22 |
| phospholipase binding | Hs | molecular function | 100 | 3.82e-22 |
| dynein intermediate chain binding | Hs | molecular function | 100 | 3.82e-22 |
| perinuclear region of cytoplasm | Hs | cellular component | 100 | 3.82e-22 |
| phosphoprotein binding | Hs | molecular function | 100 | 3.82e-22 |
| extracellular exosome | Hs | cellular component | 1543 | 0.0 |
| dynein complex binding | Hs | molecular function | 100 | 3.82e-22 |
| central region of growth cone | Hs | cellular component | 100 | 3.82e-22 |
| axon cytoplasm | Hs | cellular component | 100 | 3.82e-22 |
GO (InterProScan)
6 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| structural molecule activity | Pfam | molecular function | 5.7E-175 |
| protein binding | Pfam | molecular function | 5.7E-175 |
| intracellular protein transport | Pfam | biological process | 5.7E-175 |
| vesicle-mediated transport | Pfam | biological process | 5.7E-175 |
| membrane coat | Pfam | cellular component | 1.1E-138 |
| COPI vesicle coat | Pfam | cellular component | 5.7E-175 |
