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GENE CARD

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Gene Card

Best human hits

LRRC74A; LRRC74B; NLRC3

Species

P.mammillata

Unique Gene ID

Phmamm.g00013760

Gene Model ID

Phmamm.CG.MTP2014.S1120.g13760

Location

S1120:15076..21749

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
EF_hand_dom CDD EF-hand domain
EF_hand_dom SMART EF-hand domain
Leu-rich_rpt Pfam Leucine-rich repeat
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_hand_dom ProSiteProfiles EF-hand domain
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily

GOSlim

8 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Orthology molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
perinuclear region of cytoplasm Blast cellular component
calcium ion binding InterProScan molecular function

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 106 2.29e-23
protein binding Hs molecular function 281 3.27e-86
ATP binding Hs molecular function 106 2.29e-23
cytoplasm Hs cellular component 106 2.29e-23
microtubule organizing center Hs cellular component 106 2.29e-23
cytosol Hs cellular component 106 2.29e-23
phosphatidylinositol 3-kinase regulatory subunit binding Hs molecular function 106 2.29e-23
perinuclear region of cytoplasm Hs cellular component 106 2.29e-23

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding Pfam molecular function 2.9E-4
calcium ion binding CDD molecular function 2.55994E-9