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GENE CARD

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Gene Card

Best human hits

CALM1; TNNC1; TNNC2

Species

P.mammillata

Unique Gene ID

Phmamm.g00003460

Gene Model ID

Phmamm.CG.MTP2014.S113.g03460

Location

S113:45134..46755

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S113.g03460.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

39 results

AHC0AAA10YB02

Plate: Plate_10_B02

AHC0AAA10YH04

Plate: Plate_10_H04

AHC0AAA15YG11

Plate: Plate_15_G11

AHC0AAA24YJ10

Plate: Plate_24_J10

AHC0AAA38YE17

Plate: Plate_38_E17

AHC0AAA43YH19

Plate: Plate_43_H19

AHC0AAA45YJ03

Plate: Plate_45_J03

AHC0AAA63YK24

Plate: Plate_63_K24

AHC0AAA72YP23

Plate: Plate_72_P23

AHC0AAA105YD09

Plate: Plate_105_D09

AHC0AAA110YH07

Plate: Plate_110_H07

AHC0AAA112YN07

Plate: Plate_112_N07

AHC0AAA118YF04

Plate: Plate_118_F04

AHC0AAA135YO16

Plate: Plate_135_O16

AHC0AAA140YB19

Plate: Plate_140_B19

AHC0AAA142YO14

Plate: Plate_142_O14

AHC0AAA143YK23

Plate: Plate_143_K23

AHC0AAA145YL03

Plate: Plate_145_L03

AHC0AAA150YL09

Plate: Plate_150_L09

AHC0AAA155YG02

Plate: Plate_155_G02

AHC0AAA82YI20

Plate: Plate_82_I20

AHC0AAA85YI09

Plate: Plate_85_I09

AHC0AAA158YF21

Plate: Plate_158_F21

AHC0AAA159YB12

Plate: Plate_159_B12

AHC0AAA169YI19

Plate: Plate_169_I19

AHC0AAA178YE24

Plate: Plate_178_E24

AHC0AAA182YC23

Plate: Plate_182_C23

AHC0AAA188YC14

Plate: Plate_188_C14

AHC0AAA202YH10

Plate: Plate_202_H10

AHC0AAA203YC13

Plate: Plate_203_C13

AHC0AAA204YM24

Plate: Plate_204_M24

AHC0AAA213YE04

Plate: Plate_213_E04

AHC0AAA224YO01

Plate: Plate_224_O01

AHC0AAA225YB18

Plate: Plate_225_B18

AHC0AAA226YJ19

Plate: Plate_226_J19

AHC0AAA226YM06

Plate: Plate_226_M06

AHC0AAA226YP14

Plate: Plate_226_P14

AHC0AAA235YP07

Plate: Plate_235_P07

AHC0AAA38YG19

Plate: Plate_38_G19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
EF_hand_dom ProSiteProfiles EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
EF_hand_dom CDD EF-hand domain
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_hand_dom SMART EF-hand domain
EF_hand_dom Pfam EF-hand domain

GOSlim

38 results

GO Term Annotation Origin Type
actin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
kinase activity Blast molecular function
protein kinase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
protein homodimerization activity Blast molecular function
metal ion binding Blast molecular function
actin filament binding Blast molecular function
extracellular exosome Blast cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
enzyme binding Blast molecular function
molecular function regulator Blast molecular function
cytoplasmic part Blast cellular component
microtubule Blast cellular component
phosphotransferase activity, alcohol group as acceptor Blast molecular function
ion transport Blast biological process
transmembrane transport Blast biological process
metal ion transport Blast biological process
organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
cytoskeletal protein binding Blast molecular function
protein N-terminus binding Blast molecular function
integral component of membrane Blast cellular component
enzyme activator activity Blast molecular function
protein serine/threonine kinase activity Blast molecular function
protein dephosphorylation Blast biological process
regulation of cellular metabolic process Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

43 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
spindle pole Hs cellular component 134 7.23e-41
actin binding Hs molecular function 168 3.27e-54
Ras guanyl-nucleotide exchange factor activity Hs molecular function 134 7.23e-41
calcium ion binding Hs molecular function 168 3.27e-54
protein binding Hs molecular function 168 3.27e-54
extracellular region Hs cellular component 134 7.23e-41
nucleus Hs cellular component 134 7.23e-41
nucleoplasm Hs cellular component 134 7.23e-41
cytoplasm Hs cellular component 134 7.23e-41
centrosome Hs cellular component 134 7.23e-41
spindle Hs cellular component 134 7.23e-41
cytosol Hs cellular component 168 3.27e-54
cytoskeleton Hs cellular component 134 7.23e-41
troponin complex Hs cellular component 168 3.27e-54
spindle microtubule Hs cellular component 134 7.23e-41
plasma membrane Hs cellular component 134 7.23e-41
adenylate cyclase binding Hs molecular function 134 7.23e-41
inositol-1,4,5-trisphosphate 3-kinase activity Hs molecular function 134 7.23e-41
ligand-gated ion channel activity Hs molecular function 134 7.23e-41
kinase activity Hs molecular function 134 7.23e-41
calcium channel inhibitor activity Hs molecular function 134 7.23e-41
protein kinase binding Hs molecular function 134 7.23e-41
protein domain specific binding Hs molecular function 134 7.23e-41
sarcomere Hs cellular component 134 7.23e-41
troponin I binding Hs molecular function 146 1.96e-45
troponin T binding Hs molecular function 146 1.96e-45
titin binding Hs molecular function 134 7.23e-41
vesicle Hs cellular component 134 7.23e-41
N-terminal myristoylation domain binding Hs molecular function 134 7.23e-41
macromolecular complex Hs cellular component 134 7.23e-41
calcium channel complex Hs cellular component 134 7.23e-41
protein homodimerization activity Hs molecular function 146 1.96e-45
contractile fiber Hs cellular component 146 1.96e-45
protein serine/threonine kinase activator activity Hs molecular function 134 7.23e-41
ion channel binding Hs molecular function 134 7.23e-41
metal ion binding Hs molecular function 168 3.27e-54
calcium-dependent protein binding Hs molecular function 168 3.27e-54
actin filament binding Hs molecular function 168 3.27e-54
extracellular exosome Hs cellular component 134 7.23e-41
protein phosphatase activator activity Hs molecular function 134 7.23e-41
disordered domain specific binding Hs molecular function 134 7.23e-41
catalytic complex Hs cellular component 134 7.23e-41
cardiac Troponin complex Hs cellular component 146 1.96e-45

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding CDD molecular function 4.16763E-17