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GENE CARD

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Gene Card

Best human hits

LAMC1; LAMC3; NTN1

Species

P.mammillata

Unique Gene ID

Phmamm.g00003567

Gene Model ID

Phmamm.CG.MTP2014.S118.g03567

Location

S118:55933..57270

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA147YG11

Plate: Plate_147_G11

AHC0AAA147YG09

Plate: Plate_147_G09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Laminin_EGF Pfam Laminin EGF domain
Laminin_EGF ProSitePatterns Laminin EGF domain
Laminin_N Pfam Laminin, N-terminal
Laminin_N SMART Laminin, N-terminal
Laminin_EGF SMART Laminin EGF domain
Laminin_N ProSiteProfiles Laminin, N-terminal

GOSlim

10 results

GO Term Annotation Origin Type
structural molecule activity Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum lumen Blast cellular component
membrane Blast cellular component
extracellular exosome Blast cellular component
extracellular region part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
structural molecule activity Hs molecular function 194 1.60e-54
extracellular matrix structural constituent Hs molecular function 206 1.05e-58
protein binding Hs molecular function 214 7.05e-64
extracellular region Hs cellular component 214 7.05e-64
proteinaceous extracellular matrix Hs cellular component 214 7.05e-64
basement membrane Hs cellular component 214 7.05e-64
laminin-1 complex Hs cellular component 206 1.05e-58
extracellular space Hs cellular component 206 1.05e-58
cytoplasm Hs cellular component 214 7.05e-64
endoplasmic reticulum lumen Hs cellular component 206 1.05e-58
membrane Hs cellular component 194 1.60e-54
extracellular matrix Hs cellular component 206 1.05e-58
laminin-10 complex Hs cellular component 206 1.05e-58
laminin-11 complex Hs cellular component 206 1.05e-58
extracellular exosome Hs cellular component 206 1.05e-58

GO (InterProScan)

No result

GO Term Analysis Type e-value