Gene Card
Best human hits
COL7A1; COLQ; MARCO
Species
Unique Gene ID
Phmamm.g00013997
Gene Model ID
Phmamm.CG.MTP2014.S1181.g13997
Location
S1181:15988..18062
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
1 result
| IPR Term | Analysis | Definition |
|---|---|---|
| Collagen | Pfam | Collagen triple helix repeat |
GOSlim
34 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| Golgi membrane | Blast | cellular component |
| transmembrane signaling receptor activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| extracellular space | Blast | cellular component |
| intracellular | Blast | cellular component |
| endoplasmic reticulum lumen | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| integral component of plasma membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| cell junction | Blast | cellular component |
| identical protein binding | Blast | molecular function |
| innate immune response | Blast | biological process |
| synapse | Blast | cellular component |
| binding | Blast | molecular function |
| receptor binding | Blast | molecular function |
| enzyme regulator activity | Blast | molecular function |
| serine-type endopeptidase activity | Blast | molecular function |
| enzyme binding | Blast | molecular function |
| membrane organization | Blast | biological process |
| organelle organization | Blast | biological process |
| macromolecular complex | Blast | cellular component |
| extracellular region part | Blast | cellular component |
| signal transduction | Blast | biological process |
| signaling receptor activity | Blast | molecular function |
| cytoplasmic vesicle | Blast | cellular component |
| peptidase activity | Blast | molecular function |
| intracellular organelle part | Blast | cellular component |
| whole membrane | Blast | cellular component |
| bounding membrane of organelle | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| intracellular membrane-bounded organelle | Blast | cellular component |
| synapse part | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
31 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| Golgi membrane | Hs | cellular component | 52.0 | 3.70e-08 |
| amyloid-beta binding | Hs | molecular function | 49.3 | 3.05e-07 |
| G-protein coupled receptor binding | Hs | molecular function | 49.3 | 3.05e-07 |
| serine-type endopeptidase inhibitor activity | Hs | molecular function | 52.0 | 3.70e-08 |
| transmembrane signaling receptor activity | Hs | molecular function | 49.3 | 3.05e-07 |
| scavenger receptor activity | Hs | molecular function | 49.3 | 3.05e-07 |
| protein binding | Hs | molecular function | 52.0 | 3.70e-08 |
| extracellular region | Hs | cellular component | 52.0 | 3.70e-08 |
| proteinaceous extracellular matrix | Hs | cellular component | 52.0 | 3.70e-08 |
| collagen trimer | Hs | cellular component | 52.0 | 3.70e-08 |
| collagen type VII trimer | Hs | cellular component | 52.0 | 3.70e-08 |
| basement membrane | Hs | cellular component | 52.0 | 3.70e-08 |
| basal lamina | Hs | cellular component | 50.4 | 9.21e-08 |
| extracellular space | Hs | cellular component | 52.0 | 3.70e-08 |
| intracellular | Hs | cellular component | 49.3 | 3.05e-07 |
| endoplasmic reticulum lumen | Hs | cellular component | 52.0 | 3.70e-08 |
| plasma membrane | Hs | cellular component | 50.4 | 9.21e-08 |
| integral component of plasma membrane | Hs | cellular component | 49.3 | 3.05e-07 |
| signaling pattern recognition receptor activity | Hs | molecular function | 49.3 | 3.05e-07 |
| membrane | Hs | cellular component | 49.3 | 3.05e-07 |
| integral component of membrane | Hs | cellular component | 49.3 | 3.05e-07 |
| cell junction | Hs | cellular component | 50.4 | 9.21e-08 |
| COPII-coated ER to Golgi transport vesicle | Hs | cellular component | 52.0 | 3.70e-08 |
| peptidase inhibitor activity | Hs | molecular function | 52.0 | 3.70e-08 |
| endocytic vesicle membrane | Hs | cellular component | 49.3 | 3.05e-07 |
| extracellular matrix | Hs | cellular component | 52.0 | 3.70e-08 |
| neuromuscular junction | Hs | cellular component | 50.4 | 9.21e-08 |
| endoplasmic reticulum-Golgi intermediate compartment membrane | Hs | cellular component | 52.0 | 3.70e-08 |
| identical protein binding | Hs | molecular function | 52.0 | 3.70e-08 |
| synaptic cleft | Hs | cellular component | 50.4 | 9.21e-08 |
| synapse | Hs | cellular component | 50.4 | 9.21e-08 |
| GO Term | Analysis | Type | e-value |
|---|
