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GENE CARD

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Gene Card

Best human hits

RNF111; ZNRF1; ZNRF2

Species

P.mammillata

Unique Gene ID

Phmamm.g00014000

Gene Model ID

Phmamm.CG.MTP2014.S1182.g14000

Location

S1182:12685..17425

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1182.g14000.01.t
Phmamm.CG.MTP2014.S1182.g14000.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA140YL03

Plate: Plate_140_L03

AHC0AAA144YJ01

Plate: Plate_144_J01

AHC0AAA222YP03

Plate: Plate_222_P03

AHC0AAA253YF08

Plate: Plate_253_F08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_RING Pfam Zinc finger, RING-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING SMART Zinc finger, RING-type

GOSlim

29 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
lysosome Orthology cellular component
lysosomal membrane Orthology cellular component
endosome Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
membrane Orthology cellular component
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
cell junction Orthology cellular component
cytoplasmic vesicle Orthology cellular component
macromolecular complex Orthology cellular component
synapse Orthology cellular component
metal ion binding Orthology molecular function
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
organelle membrane Orthology cellular component
synaptic membrane Orthology cellular component
neuron part Orthology cellular component
proteolysis Orthology biological process
nuclear body Blast cellular component
synapse part Blast cellular component
endomembrane system Blast cellular component

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein polyubiquitination Hs biological process
ubiquitin-protein transferase activity Hs molecular function
cytoplasm Hs cellular component
lysosome Hs cellular component
lysosomal membrane Hs cellular component
endosome Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
endosome membrane Hs cellular component
membrane Hs cellular component
protein ubiquitination Hs biological process
transferase activity Hs molecular function
cell junction Hs cellular component
cytoplasmic vesicle membrane Hs cellular component
macromolecular complex Hs cellular component
presynaptic membrane Hs cellular component
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
synapse Hs cellular component
metal ion binding Hs molecular function
ubiquitin protein ligase activity Hs molecular function

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 141 1.11e-41
protein binding Hs molecular function 111 1.19e-29
nucleus Hs cellular component 60.1 1.75e-10
nucleoplasm Hs cellular component 60.1 1.75e-10
cytoplasm Hs cellular component 141 1.11e-41
lysosome Hs cellular component 141 1.11e-41
lysosomal membrane Hs cellular component 141 1.11e-41
endosome Hs cellular component 141 1.11e-41
cytosol Hs cellular component 141 1.11e-41
plasma membrane Hs cellular component 141 1.11e-41
endosome membrane Hs cellular component 141 1.11e-41
membrane Hs cellular component 141 1.11e-41
PML body Hs cellular component 60.1 1.75e-10
transferase activity Hs molecular function 141 1.11e-41
cell junction Hs cellular component 141 1.11e-41
cytoplasmic vesicle membrane Hs cellular component 141 1.11e-41
synaptic vesicle membrane Hs cellular component 111 1.19e-29
cytoplasmic vesicle Hs cellular component 111 1.19e-29
SUMO polymer binding Hs molecular function 60.1 1.75e-10
macromolecular complex Hs cellular component 141 1.11e-41
presynaptic membrane Hs cellular component 141 1.11e-41
synapse Hs cellular component 141 1.11e-41
SMAD binding Hs molecular function 60.1 1.75e-10
metal ion binding Hs molecular function 141 1.11e-41
ubiquitin protein ligase activity Hs molecular function 141 1.11e-41

GO (InterProScan)

No result

GO Term Analysis Type e-value

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